Pre_GI: BLASTP Hits

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Query: NC_008595:2687245:2687743 Mycobacterium avium 104, complete genome

Start: 2687743, End: 2689083, Length: 1341

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016948:2931285:2979810297981029811501341Mycobacterium intracellulare MOTT-64 chromosome, complete genometranscriptional regulator0781
NC_012522:7763426:7763426776342677647541329Rhodococcus opacus B4, complete genomeputative TetR family transcriptional regulator1e-159563
NC_008595:1844500:184985018498501850479630Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein4e-1066.6
NC_006322:1959918:196837919683791968957579Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-0962.4
NC_016629:3789554:382760938276093828244636Desulfovibrio africanus str. Walvis Bay chromosome, completeregulatory protein TetR3e-0757
NC_009328:3241166:326696632669663267598633Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeTetR family transcriptional regulator5e-0756.2
NC_009848:3582384:359831935983193598969651Bacillus pumilus SAFR-032, complete genomeTetR family transcriptional regulator6e-0755.8
NC_015557:765500:785162785162785776615Hydrogenobaculum sp. 3684 chromosome, complete genometranscriptional regulator, TetR family6e-0755.8
NC_015587:765500:785217785217785831615Hydrogenobaculum sp. SHO chromosome, complete genometranscriptional regulator, TetR family6e-0755.8
NC_020411:765500:785189785189785803615Hydrogenobaculum sp. HO, complete genometranscriptional regulator, TetR family6e-0755.8
NC_003869:74836:778127781278402591Thermoanaerobacter tengcongensis MB4, complete genomeTranscriptional regulator9e-0755.5
NC_011898:2509267:253223225322322532846615Clostridium cellulolyticum H10, complete genometranscriptional regulator, TetR family8e-0755.5
NC_011126:779500:798647798647799261615Hydrogenobaculum sp. Y04AAS1, complete genometranscriptional regulator, TetR family1e-0655.1
NC_015312:5579078:559739255973925598159768Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeregulatory protein TetR1e-0655.1
NC_018750:4688968:469072446907244691359636Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, TetR family2e-0654.3
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family2e-0653.9
NC_007947:290864:305887305887306441555Methylobacillus flagellatus KT, complete genometranscriptional regulator, TetR family3e-0653.9
NC_016111:1:268526853368684Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator4e-0653.1
NC_017904:1896322:190884219088421909444603Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator6e-0652.8
NC_008595:2546696:258079325807932581404612Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein6e-0652.4
NC_012660:5793200:581114258111425811780639Pseudomonas fluorescens SBW25 chromosome, complete genomeputative TetR family regulatory protein6e-0652.4
NC_007907:3472494:347712934771293477731603Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-0652
NC_011830:4473583:449130044913004491902603Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, TetR family9e-0652