Pre_GI: BLASTP Hits

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Query: NC_008593:841291:842740 Clostridium novyi NT, complete genome

Start: 842740, End: 844071, Length: 1332

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:906969:9084169084169097351320Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein2e-156552
NC_012563:2979147:2998706299870629999051200Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein7e-118424
NC_009697:2680607:2697530269753026987291200Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein1e-116420
NC_008261:2117207:2134911213491121361971287Clostridium perfringens ATCC 13124, complete genomehypothetical protein9e-64244
NC_003366:1901898:1919598191959819208841287Clostridium perfringens str. 13, complete genomeprobable lipoprotein1e-62240
NC_008262:1795914:1808961180896118102471287Clostridium perfringens SM101, complete genomehypothetical protein1e-62240
NC_010723:2735196:2750889275088927521901302Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein3e-61236
NC_010674:2930259:2946576294657629478801305Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein4e-60232
NC_010718:3039434:3043822304382230456601839Natranaerobius thermophilus JW/NM-WN-LF, complete genomeGlucose/sorbosone dehydrogenase-like protein8e-35148