Pre_GI: BLASTP Hits

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Query: NC_008593:37456:55356 Clostridium novyi NT, complete genome

Start: 55356, End: 57710, Length: 2355

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007530:1459412:1473989147398914767932805Bacillus anthracis str. 'Ames Ancestor', complete genomeATP-dependent DNA helicase7e-0963.5
NC_005945:1459357:1473943147394314767472805Bacillus anthracis str. Sterne, complete genomeATP-dependent DNA helicase7e-0963.5
NC_011663:3181579:3200526320052632025982073Shewanella baltica OS223 chromosome, complete genomeATP-dependent DNA helicase DinG4e-1170.5
NC_012668:1623350:1651160165116016532352076Vibrio cholerae MJ-1236 chromosome 1, complete sequenceATP-dependent DNA helicase DinG4e-0963.9
NC_000909:858840:8714928714928734471956Methanocaldococcus jannaschii DSM 2661, complete genomeATP-dependent DNA helicase DinG, putative (dinG)2e-0758.5
NC_014012:3356629:3369385336938533714902106Shewanella violacea DSS12, complete genomeATP-dependent helicase DinG6e-1170.1
NC_018870:2537350:2559345255934525612611917Thermacetogenium phaeum DSM 12270 chromosome, complete genomeATP-dependent helicase YoaA4e-1273.9
NC_012632:1785210:1785210178521017868621653Sulfolobus islandicus M.16.27 chromosome, complete genomeDEAD/DEAH box helicase6e-1273.6
NC_009440:1810301:1811079181107918127041626Metallosphaera sedula DSM 5348 chromosome, complete genomeDEAD/DEAH box helicase3e-1894.4
NC_012588:1655615:1659312165931216609641653Sulfolobus islandicus M.14.25 chromosome, complete genomeDEAD/DEAH box helicase5e-1273.6
NC_009440:79263:1088711088711104841614Metallosphaera sedula DSM 5348 chromosome, complete genomeDEAD/DEAH box helicase5e-1067
NC_012726:1685442:1685442168544216870941653Sulfolobus islandicus M.16.4 chromosome, complete genomeDEAD/DEAH box helicase5e-1273.6
NC_013202:771161:7939187939187961372220Halomicrobium mukohataei DSM 12286, complete genomeDEAD_2 domain protein2e-1378.2
NC_013895:1086500:1101402110140211038822481Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeDEAD_2 domain protein9e-121434
NC_008609:1976403:1985878198587819883012424Pelobacter propionicus DSM 2379, complete genomeDEAD_2 domain protein2e-91337
NC_015435:354837:3723863723863740261641Metallosphaera cuprina Ar-4 chromosome, complete genomeDEAD_2 domain-containing protein1e-1172.4
NC_014731:296000:3138503138503171223273Halogeometricum borinquense DSM 11551 plasmid pHBOR02, completeDEAD_2 domain-containing protein2e-1068.6
NC_020207:1614000:1614241161424116166162376Enterococcus faecium NRRL B-2354, complete genomeDinG family ATP-dependent helicase conserved hypothetical protein3e-178625
NC_021182:2422226:2427789242778924301432355Clostridium pasteurianum BC1, complete genomeDNA helicase, Rad30872
NC_015474:1216971:1235488123548812374041917Pyrococcus sp. NA2 chromosome, complete genomeDNA repair helicase rad35e-33143
NC_000868:1299027:1299744129974413016571914Pyrococcus abyssi GE5, complete genomedna repair helicase rad32e-35151
NC_003413:893960:8953958953958972901896Pyrococcus furiosus DSM 3638, complete genomeDNA repair helicase rad3, putative3e-36154
NC_014622:5378000:5399269539926954016412373Paenibacillus polymyxa SC2 chromosome, complete genomehelicase0641
NC_016641:1148220:1167520116752011698802361Paenibacillus terrae HPL-003 chromosome, complete genomehelicase0641
NC_009635:985935:99907999907910011992121Methanococcus aeolicus Nankai-3 chromosome, complete genomehelicase6e-0963.5
NC_008782:2568027:2582635258263525852022568Acidovorax sp. JS42, complete genomehelicase c26e-100365
NC_014541:1280835:1280835128083512829102076Ferrimonas balearica DSM 9799 chromosome, complete genomehelicase c28e-1272.8
NC_008322:2983951:2999035299903530011072073Shewanella sp. MR-7, complete genomehelicase c21e-0965.9
NC_015151:665346:6784156784156800071593Vulcanisaeta moutnovskia 768-28 chromosome, complete genomehelicase c23e-1481.3
NC_009052:1899954:1899954189995419020262073Shewanella baltica OS155, complete genomehelicase c26e-1170.1
NC_009135:330628:3306283306283326372010Methanococcus maripaludis C5, complete genomehelicase c26e-1170.1
NC_008577:3125675:3138875313887531409472073Shewanella sp. ANA-3 chromosome 1, complete sequencehelicase c21e-0965.9
NC_008553:1809780:1815362181536218175812220Methanosaeta thermophila PT, complete genomehelicase c22e-28127
NC_009092:2902171:2922369292236929244412073Shewanella loihica PV-4, complete genomehelicase c25e-1377
NC_009637:438037:4755144755144775232010Methanococcus maripaludis C7 chromosome, complete genomehelicase c29e-1272.8
NC_008321:2922000:2938352293835229404242073Shewanella sp. MR-4, complete genomehelicase c21e-0965.9
NC_015425:34861:5585455854582052352Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein01265
NC_009454:1462930:1466970146697014697832814Pelotomaculum thermopropionicum SI, complete genomehypothetical protein9e-1066.2
NC_003106:2272313:2287204228720422888501647Sulfolobus tokodaii str. 7, complete genomehypothetical protein2e-0965.1
NC_015847:1261276:1293731129373112957402010Methanococcus maripaludis XI chromosome, complete genomeputative dinG ATP-dependent helicase7e-1170.1
NC_003030:1811820:1816050181605018184252376Clostridium acetobutylicum ATCC 824, complete genomeRad3-related DNA helicase0769
NC_015687:1811573:1817650181765018200252376Clostridium acetobutylicum DSM 1731 chromosome, complete genomeRad3-related DNA helicase0769
NC_017295:1809386:1815463181546318178382376Clostridium acetobutylicum EA 2018 chromosome, complete genomeRad3-related DNA helicase0769
NC_015518:1095879:1096917109691710984821566Acidianus hospitalis W1 chromosome, complete genomeXPD repair helicase3e-1274.7
NC_017275:1705827:1709524170952417111761653Sulfolobus islandicus HVE10/4 chromosome, complete genomeXPD repair helicase2e-1274.7
NC_007181:141299:1550411550411566961656Sulfolobus acidocaldarius DSM 639, complete genomeXPD/Rad3 related DNA helicase2e-1171.6