Pre_GI: BLASTP Hits

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Query: NC_008593:37456:40078 Clostridium novyi NT, complete genome

Start: 40078, End: 41808, Length: 1731

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:34861:3933539335410471713Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein0805
NC_014377:669216:6705536705536722591707Thermosediminibacter oceani DSM 16646 chromosome, complete genomeABC transporter, ATPase, predicted2e-155549
NC_007168:195638:2054462054462071491704Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-149530
NC_016148:141011:1590771590771608011725Thermovirga lienii DSM 17291 chromosome, complete genomeABC transporter ATPase4e-145515
NC_004461:245768:2457682457682474711704Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein5e-144511
NC_015966:2841420:2842361284236128441091749Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeABC transporter ATPase3e-143508
NC_013205:19295:2111421114228261713Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,ABC transporter, ATPase, predicted1e-141503
NC_009328:448224:4991314991315008341704Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein7e-137488
NC_014761:1795304:1813856181385618155561701Oceanithermus profundus DSM 14977 chromosome, complete genomeABC transporter, atpase, predicted6e-113408
NC_014210:965130:9798699798699816201752Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,ABC transporter, ATPase, predicted4e-109395
NC_020302:2829484:2849818284981828515301713Corynebacterium halotolerans YIM 70093 = DSM 44683, completeputative ATPase of the ABC class1e-108394
NC_009456:787322:7893317893317909801650Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein8e-103374
NC_015859:1147537:1151716115171611533711656Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein9e-91334
NC_014122:939190:9560879560879574121326Methanocaldococcus infernus ME chromosome, complete genomeABC transporter, ATPase, predicted2e-21104
NC_013156:1240926:1249824124982412511701347Methanocaldococcus fervens AG86, complete genomeABC transporter, ATPase, predicted7e-2099.4