Pre_GI: BLASTP Hits

Some Help

Query: NC_008593:2527064:2543112 Clostridium novyi NT, complete genome

Start: 2543112, End: 2543381, Length: 270

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2752482:276855427685542768823270Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein7e-44175
NC_012563:1:427942794542264Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein9e-37151
NC_010520:1:412741274390264Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein9e-37151
NC_010516:1:415041504413264Clostridium botulinum B1 str. Okra, complete genomehypothetical protein9e-37151
NC_009495:1:412241224385264Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein9e-37151
NC_009697:1:412241224385264Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein9e-37151
NC_009698:1:412241224385264Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein9e-37151
NC_009699:1:412341234386264Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein9e-37151
NC_012658:1:428642864549264Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein9e-37151
NC_017297:1:412341234386264Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein9e-37151
NC_021182:1:455845584821264Clostridium pasteurianum BC1, complete genomehypothetical protein7e-36149
NC_015687:1:448944894821333Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein9e-36148
NC_003030:1:448944894821333Clostridium acetobutylicum ATCC 824, complete genomeUncharacterized small conserved protein, ortholog of YAAB B.subtilis9e-36148
NC_010674:1:432343234583261Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein3e-35147
NC_010723:1:427542754535261Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein3e-35147
NC_014328:1:423642364499264Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein1e-34145
NC_020291:1:423042304490261Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein8e-35145
NC_009706:1:414741474410264Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein7e-35145
NC_011837:1:414141414410270Clostridium kluyveri NBRC 12016, complete genomehypothetical protein7e-35145
NC_003366:1:466546654925261Clostridium perfringens str. 13, complete genomehypothetical protein4e-34143
NC_008261:1:466646664926261Clostridium perfringens ATCC 13124, complete genomehypothetical protein4e-34143
NC_008262:1:449044904750261Clostridium perfringens SM101, complete genomehypothetical protein4e-34143
NC_014393:1:455645564819264Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein3e-33140
NC_010718:1:521852185517300Natranaerobius thermophilus JW/NM-WN-LF, complete genomehypothetical protein3e-1270.9
NC_018664:1:428942894576288Clostridium acidurici 9a chromosome, complete genomehypothetical protein1e-1168.9
NC_009922:1:442244224757336Alkaliphilus oremlandii OhILAs, complete genomeconserved hypothetical protein1e-1168.9
NC_015565:2879603:406040604320261Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein2e-1167.8
NC_021184:1:447544754708234Desulfotomaculum gibsoniae DSM 7213, complete genomeprotein of unknown function (DUF370)9e-1165.5
NC_014654:1:424142414501261Halanaerobium sp. 'sapolanicus' chromosome, complete genomehypothetical protein2e-1064.7
NC_014378:525717:532553255582258Acetohalobium arabaticum DSM 5501 chromosome, complete genomehypothetical protein3e-1063.9
NC_014378:4428:532553255582258Acetohalobium arabaticum DSM 5501 chromosome, complete genomehypothetical protein3e-1063.9
NC_014152:1:414141414395255Thermincola sp. JR, complete genomehypothetical protein2e-0960.8
NC_014098:3372000:444444444701258Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein8e-0958.9
NC_015519:2739347:465446544920267Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein2e-0754.7
NC_013895:66641:939649396494242279Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein6e-0752.8