Pre_GI: BLASTP Hits

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Query: NC_008593:2527064:2532690 Clostridium novyi NT, complete genome

Start: 2532690, End: 2533199, Length: 510

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2752482:275809827580982758562465Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein2e-41168
NC_004557:32094:376413764138144504Clostridium tetani E88, complete genomehypothetical protein7e-29126
NC_015687:1:147351473515211477Clostridium acetobutylicum DSM 1731 chromosome, complete genomeHD superfamily hydrolase3e-24110
NC_003030:1:147351473515211477Clostridium acetobutylicum ATCC 824, complete genomePredicted HD superfamily hydrolase3e-24110
NC_012563:1:146241462415076453Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein2e-22105
NC_010516:1:144711447114923453Clostridium botulinum B1 str. Okra, complete genomehypothetical protein2e-22105
NC_017297:1:144181441814870453Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein2e-22105
NC_009698:1:144421444214894453Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein2e-22104
NC_009697:1:144421444214894453Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein2e-22104
NC_009495:1:144271442714879453Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein2e-22104
NC_014328:1:145991459915102504Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein1e-21102
NC_009699:1:143821438214804423Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein3e-21101
NC_010520:1:144511445114873423Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein6e-21100
NC_010674:1:146791467915182504Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein1e-2098.6
NC_010723:1:146331463315136504Clostridium botulinum E3 str. Alaska E43, complete genomeputative HD domain2e-2098.2
NC_014393:1:151741517415683510Clostridium cellulovorans 743B chromosome, complete genomemetal-dependent phosphohydrolase HD sub domain1e-1995.9
NC_009706:1:148251482515238414Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-1994
NC_011837:1:148251482515238414Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-1994
NC_012658:1:145621456215014453Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein6e-1890.1
NC_008261:1:154221542215925504Clostridium perfringens ATCC 13124, complete genomehypothetical protein3e-1684.3
NC_003366:1:156331563315926294Clostridium perfringens str. 13, complete genomehypothetical protein2e-0755.1
NC_020291:1:146841468415193510Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative domain HDIG-containing protein2e-0755.1