Pre_GI: BLASTP Hits

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Query: NC_008593:2527064:2529421 Clostridium novyi NT, complete genome

Start: 2529421, End: 2532147, Length: 2727

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2752482:2754826275482627575552730Clostridium botulinum BKT015925 chromosome, complete genomemembrane protein01313
NC_014328:1:1578315783185002718Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein0887
NC_009706:1:1594615946186602715Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein0877
NC_011837:1:1591615916186602745Clostridium kluyveri NBRC 12016, complete genomehypothetical protein0877
NC_015687:1:1582615826185462721Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein0869
NC_003030:1:1582615826185462721Clostridium acetobutylicum ATCC 824, complete genomehypothetical protein0869
NC_012563:1:1678316783194642682Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein0849
NC_009699:1:1651116511191922682Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein0847
NC_017297:1:1657716577192582682Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein0847
NC_010516:1:1663016630193112682Clostridium botulinum B1 str. Okra, complete genomehypothetical protein0846
NC_010520:1:1658016580192612682Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein0845
NC_012658:1:1672116721194022682Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein0843
NC_004557:32094:3440534405370682664Clostridium tetani E88, complete genomehypothetical protein0820
NC_008261:1:1627416274190302757Clostridium perfringens ATCC 13124, complete genomehypothetical protein0766
NC_003366:1:1627716277190332757Clostridium perfringens str. 13, complete genomehypothetical protein0766
NC_014393:1:1651616516192512736Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein0734
NC_016894:1092005:1092005109200510947462742Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein3e-148526
NC_013741:809030:8100668100668126512586Archaeoglobus profundus DSM 5631, complete genomeprotein of unknown function UPF01822e-142507
NC_008609:3921113:3941375394137539440772703Pelobacter propionicus DSM 2379, complete genomeprotein of unknown function UPF01825e-139495
NC_011894:3578500:3583967358396735866572691Methylobacterium nodulans ORS 2060, complete genomeprotein of unknown function UPF01823e-136486
NC_019940:1727384:1735179173517917379652787Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein3e-116420
NC_004113:1234048:1234048123404812369152868Thermosynechococcus elongatus BP-1, complete genomehypothetical protein3e-114413
NC_013235:1761539:1761539176153917644872949Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function UPF01822e-86321
NC_014318:1320170:1323449132344913264483000Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein3e-83310
NC_017186:1320186:1323465132346513264643000Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein3e-83310
NC_014246:57021:9300493004963303327Mobiluncus curtisii ATCC 43063 chromosome, complete genomeintegral membrane protein3e-83310
NC_016799:731849:7343257343257372882964Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein3e-79297
NC_006958:828089:8280898280898310462958Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein2e-78294
NC_016788:655175:6551756551756581382964Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein2e-77291
NC_019673:1039258:1042434104243410454212988Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-77291
NC_013093:1036772:1044282104428210472873006Actinosynnema mirum DSM 43827, complete genomeprotein of unknown function UPF01823e-75284
NC_010545:619346:6200246200246230263003Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein1e-74281
NC_008705:1537080:1537080153708015400913012Mycobacterium sp. KMS, complete genomeprotein of unknown function UPF01825e-74279