Pre_GI: BLASTP Hits

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Query: NC_008593:2457594:2498158 Clostridium novyi NT, complete genome

Start: 2498158, End: 2498274, Length: 117

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2690448:273247227324722732588117Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA1e-1479
NC_008593:2457594:247208524720852472201117Clostridium novyi NT, complete genome5S ribosomal RNA1e-1479
NC_008593:1917118:192377919237791923895117Clostridium novyi NT, complete genome5S ribosomal RNA1e-1479
NC_008593:2457594:248735024873502487466117Clostridium novyi NT, complete genome5S ribosomal RNA1e-1479
NC_008593:2020473:202788120278812027997117Clostridium novyi NT, complete genome5S ribosomal RNA1e-1479
NC_008593:1917118:194623119462311946347117Clostridium novyi NT, complete genome5S ribosomal RNA1e-1479
NC_015425:2144639:215050421505042150620117Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA2e-1477.8
NC_015425:2690448:272133427213342721450117Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA2e-1477.8
NC_015425:2690448:270442227044222704530109Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA1e-1375.1
NC_015425:2690448:269780326978032697911109Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA1e-1375.1
NC_015425:2144639:216953321695332169641109Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA1e-1375.1
NC_015425:2277570:228377922837792283884106Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA3e-1373.9
NC_015425:2690448:270495827049582705064107Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA3e-1373.9
NC_015425:2752482:275884827588482758964117Clostridium botulinum BKT015925 chromosome, complete genome5S ribosomal RNA1e-1272
NC_008593:2527064:253346325334632533579117Clostridium novyi NT, complete genome5S ribosomal RNA4e-1270.1
NC_008593:2457594:246476924647692464885117Clostridium novyi NT, complete genome5S ribosomal RNA4e-1270.1
NC_010516:42475:676856768567801117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA5e-1166.6
NC_012563:36000:689726897269088117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA5e-1166.6
NC_010516:42475:746917469174807117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA5e-1166.6
NC_009697:444801:458885458885459001117Clostridium botulinum A str. ATCC 19397 chromosome, complete5S ribosomal RNA5e-1166.6
NC_009698:467500:479273479273479389117Clostridium botulinum A str. Hall chromosome, complete genome5S ribosomal RNA5e-1166.6
NC_009699:33452:697436974369859117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA5e-1166.6
NC_012563:36000:475414754147657117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA5e-1166.2
NC_009495:38000:679096790968034126Clostridium botulinum A str. ATCC 3502 chromosome, complete genome5S ribosomal RNA1e-1065.5
NC_009697:1:139971399714113117Clostridium botulinum A str. ATCC 19397 chromosome, complete5S ribosomal RNA1e-1065.1
NC_010516:42475:598835988359999117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA1e-1065.1
NC_010516:42475:532765327653392117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA1e-1065.1
NC_010516:3807780:381717538171753817291117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA1e-1065.1
NC_012563:519037:533064533064533180117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA1e-1065.1
NC_010520:35845:750357503575151117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA1e-1065.1
NC_012563:4004709:401933940193394019455117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA1e-1065.1
NC_010520:1:139761397614092117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA1e-1065.1
NC_012563:4004709:401410340141034014219117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA1e-1065.1
NC_009697:3711692:372216737221673722283117Clostridium botulinum A str. ATCC 19397 chromosome, complete5S ribosomal RNA1e-1065.1
NC_010520:35845:617506175061866117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA1e-1065.1
NC_012563:1:141771417714293117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA1e-1065.1
NC_010520:496500:508096508096508212117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA1e-1065.1
NC_009698:1:139971399714113117Clostridium botulinum A str. Hall chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009495:1:139821398214107126Clostridium botulinum A str. ATCC 3502 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_012563:36000:540995409954215117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA1e-1065.1
NC_010520:3837378:384677238467723846888117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA1e-1065.1
NC_012563:36000:751877518775303117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA1e-1065.1
NC_012563:36000:619686196862084117Clostridium botulinum A2 str. Kyoto, complete genome5S ribosomal RNA1e-1065.1
NC_010520:35845:687546875468870117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA1e-1065.1
NC_010516:42475:809098090981025117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA1e-1065.1
NC_010520:35845:538745387453990117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA1e-1065.1
NC_009697:38000:532145321453330117Clostridium botulinum A str. ATCC 19397 chromosome, complete5S ribosomal RNA1e-1065.1
NC_009697:38000:598525985259968117Clostridium botulinum A str. ATCC 19397 chromosome, complete5S ribosomal RNA1e-1065.1
NC_009697:38000:740527405274168117Clostridium botulinum A str. ATCC 19397 chromosome, complete5S ribosomal RNA1e-1065.1
NC_012658:1:141191411914235117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_012658:35500:471724717247288117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_012658:35500:538275382753943117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_012658:35500:617566175661872117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_012658:35500:688166881668932117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_012658:3827500:383685838368583836974117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009495:38000:812498124981374126Clostridium botulinum A str. ATCC 3502 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009495:38000:531995319953324126Clostridium botulinum A str. ATCC 3502 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009495:38000:599915999160116126Clostridium botulinum A str. ATCC 3502 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009495:482500:493948493948494073126Clostridium botulinum A str. ATCC 3502 chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009699:490652:505112505112505228117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009699:3839575:385420738542073854323117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009698:3609881:361927636192763619392117Clostridium botulinum A str. Hall chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009698:38000:532145321453330117Clostridium botulinum A str. Hall chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009698:38000:598535985359969117Clostridium botulinum A str. Hall chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009698:38000:740537405374169117Clostridium botulinum A str. Hall chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009699:1:139071390714023117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009699:33452:484864848648602117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009699:33452:549405494055056117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009699:33452:628046280462920117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009699:33452:759577595776073117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009699:3839575:384896938489693849085117Clostridium botulinum F str. Langeland chromosome, complete genome5S ribosomal RNA1e-1065.1
NC_009495:38000:749147491475039126Clostridium botulinum A str. ATCC 3502 chromosome, complete genome5S ribosomal RNA3e-1063.9
NC_009697:38000:677176771767833117Clostridium botulinum A str. ATCC 19397 chromosome, complete5S ribosomal RNA3e-1063.9
NC_009698:38000:677186771867834117Clostridium botulinum A str. Hall chromosome, complete genome5S ribosomal RNA3e-1063.9
NC_010516:1:140261402614142117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA8e-1062.4
NC_010520:3837378:385199938519993852115117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA8e-1062.4
NC_010516:514000:525401525401525517117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA8e-1062.4
NC_009697:3711692:372740537274053727521117Clostridium botulinum A str. ATCC 19397 chromosome, complete5S ribosomal RNA8e-1062.4
NC_009698:3609881:362451436245143624630117Clostridium botulinum A str. Hall chromosome, complete genome5S ribosomal RNA8e-1062.4
NC_012658:35500:751507515075266117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA8e-1062.4
NC_012658:3827500:384209338420933842209117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA8e-1062.4
NC_010520:35845:473354733547451117Clostridium botulinum A3 str. Loch Maree, complete genome5S ribosomal RNA7e-1062.4
NC_010516:3807780:382241038224103822526117Clostridium botulinum B1 str. Okra, complete genome5S ribosomal RNA8e-1062.4
NC_012658:482313:496216496216496332117Clostridium botulinum Ba4 str. 657 chromosome, complete genome5S ribosomal RNA4e-0960.1
NC_003030:155554:163004163004163120117Clostridium acetobutylicum ATCC 824, complete genome5Sb ribosomal RNA7e-0855.8
NC_015687:155554:163004163004163120117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Sb ribosomal RNA7e-0855.8
NC_015687:303810:335708335708335824117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Sg ribosomal RNA1e-0755.1
NC_003030:303812:335711335711335827117Clostridium acetobutylicum ATCC 824, complete genome5Sg ribosomal RNA1e-0755.1
NC_003030:303812:315559315559315675117Clostridium acetobutylicum ATCC 824, complete genome5Sf ribosomal RNA2e-0754.3
NC_015687:1097447:110992811099281110044117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Sj ribosomal RNA2e-0754.3
NC_003030:1097625:111010611101061110222117Clostridium acetobutylicum ATCC 824, complete genome5Sj ribosomal RNA2e-0754.3
NC_015687:303810:315556315556315672117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Sf ribosomal RNA2e-0754.3
NC_015687:1:143771437714493117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Sa ribosomal RNA2e-0754.3
NC_003030:3324834:333267433326743332790117Clostridium acetobutylicum ATCC 824, complete genome5Sk ribosomal RNA2e-0754.3
NC_015687:303810:340846340846340962117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Sh ribosomal RNA2e-0754.3
NC_015687:155554:168142168142168258117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Sc ribosomal RNA2e-0754.3
NC_003030:249648:259356259356259472117Clostridium acetobutylicum ATCC 824, complete genome5Se ribosomal RNA2e-0754.3
NC_015687:3326461:333430133343013334417117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Sk ribosomal RNA2e-0754.3
NC_015687:250768:259354259354259470117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Se ribosomal RNA2e-0754.3
NC_003030:1:143771437714493117Clostridium acetobutylicum ATCC 824, complete genome5Sa ribosomal RNA2e-0754.3
NC_003030:303812:345987345987346103117Clostridium acetobutylicum ATCC 824, complete genome5Si ribosomal RNA4e-0753.5
NC_015687:303810:345983345983346099117Clostridium acetobutylicum DSM 1731 chromosome, complete genome5Si ribosomal RNA4e-0753.5
NS_000195:1785910:179617717961771796293117Candidatus Cloacamonas acidaminovoransribosomal RNA 5s6e-0752.8
NS_000195:1257834:126545212654521265568117Candidatus Cloacamonas acidaminovoransribosomal RNA 5s6e-0752.8
NC_007759:723675:743084743084743204121Syntrophus aciditrophicus SB, complete genome5S RNA1e-0652
NC_014972:2659388:267110126711012671217117Desulfobulbus propionicus DSM 2032 chromosome, complete genome5S ribosomal RNA1e-0651.6
NC_014972:2980974:299203729920372992153117Desulfobulbus propionicus DSM 2032 chromosome, complete genome5S ribosomal RNA1e-0651.6
NC_010516:1:140411404114160120Clostridium botulinum B1 str. Okra, complete genomehypothetical protein2e-0651.2
NC_010723:3530000:354422535442253544341117Clostridium botulinum E3 str. Alaska E43, complete genome5S ribosomal RNA4e-0650.1
NC_010723:3530000:353833235383323538448117Clostridium botulinum E3 str. Alaska E43, complete genome5S ribosomal RNA4e-0650.1
NC_010674:3674739:368684836868483686964117Clostridium botulinum B str. Eklund 17B, complete genome5S ribosomal RNA5e-0650.1
NC_010674:3674739:369975836997583699874117Clostridium botulinum B str. Eklund 17B, complete genome5S ribosomal RNA5e-0650.1
NC_010674:3674739:368114836811483681264117Clostridium botulinum B str. Eklund 17B, complete genome5S ribosomal RNA5e-0650.1
NC_010674:3674739:371539037153903715506117Clostridium botulinum B str. Eklund 17B, complete genome5S ribosomal RNA5e-0650.1
NC_010723:3530000:356279235627923562908117Clostridium botulinum E3 str. Alaska E43, complete genome5S ribosomal RNA4e-0650.1
NC_010674:3581044:358871435887143588830117Clostridium botulinum B str. Eklund 17B, complete genome5S ribosomal RNA4e-0650.1
NC_010723:3530000:357277435727743572890117Clostridium botulinum E3 str. Alaska E43, complete genome5S ribosomal RNA4e-0650.1
NC_010723:3530000:355094735509473551063117Clostridium botulinum E3 str. Alaska E43, complete genome5S ribosomal RNA4e-0650.1
NC_010674:3674739:369361436936143693730117Clostridium botulinum B str. Eklund 17B, complete genome5S ribosomal RNA4e-0650.1
NC_010674:192951:205433205433205549117Clostridium botulinum B str. Eklund 17B, complete genome5S ribosomal RNA4e-0650.1
NC_010674:3674739:370579737057973705913117Clostridium botulinum B str. Eklund 17B, complete genome5S ribosomal RNA4e-0650.1
NC_010723:3530000:355684035568403556956117Clostridium botulinum E3 str. Alaska E43, complete genome5S ribosomal RNA4e-0650.1
NC_010723:173280:207269207269207385117Clostridium botulinum E3 str. Alaska E43, complete genome5S ribosomal RNA4e-0650.1
NC_021182:4602683:461081146108114610927117Clostridium pasteurianum BC1, complete genome5S ribosomal RNA8e-0649.3
NC_021182:93000:131490131490131606117Clostridium pasteurianum BC1, complete genome5S ribosomal RNA8e-0649.3
NC_021182:3409199:341551834155183415634117Clostridium pasteurianum BC1, complete genome5S ribosomal RNA8e-0649.3
NC_021182:162236:173593173593173709117Clostridium pasteurianum BC1, complete genome5S ribosomal RNA8e-0649.3
NC_008346:36176:495744957449687114Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete5S ribosomal RNA9e-0648.9
NC_008346:410940:422988422988423101114Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete5S ribosomal RNA9e-0648.9
NC_009012:3421000:343249734324973432613117Clostridium thermocellum ATCC 27405, complete genome5S ribosomal RNA9e-0648.9
NC_009012:3591687:360416736041673604283117Clostridium thermocellum ATCC 27405, complete genome5S ribosomal RNA9e-0648.9
NC_009012:3653111:367039136703913670507117Clostridium thermocellum ATCC 27405, complete genome5S ribosomal RNA9e-0648.9
NC_009012:2806000:281341728134172813533117Clostridium thermocellum ATCC 27405, complete genome5S ribosomal RNA9e-0648.9