Pre_GI: BLASTP Hits

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Query: NC_008593:2457594:2457594 Clostridium novyi NT, complete genome

Start: 2457594, End: 2458544, Length: 951

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2690448:269245826924582693408951Clostridium botulinum BKT015925 chromosome, complete genomeMg2+ transporter protein, CorA family protein4e-163573
NC_012563:36000:775347753478475942Clostridium botulinum A2 str. Kyoto, complete genometransporter, CorA metal ion transporter family8e-118423
NC_010516:42475:832668326684207942Clostridium botulinum B1 str. Okra, complete genometransporter, CorA metal ion transporter family8e-118423
NC_009495:38000:836098360984550942Clostridium botulinum A str. ATCC 3502 chromosome, complete genometransporter CorA metal ion transporter family8e-118423
NC_009697:38000:764127641277353942Clostridium botulinum A str. ATCC 19397 chromosome, completeCorA family protein8e-118423
NC_009698:38000:764137641377354942Clostridium botulinum A str. Hall chromosome, complete genomeCorA family protein8e-118423
NC_009699:33452:783037830379244942Clostridium botulinum F str. Langeland chromosome, complete genomeCorA family protein8e-118423
NC_017297:33519:785717857179512942Clostridium botulinum F str. 230613 chromosome, complete genometransporter, CorA metal ion transporter family8e-118423
NC_010520:35845:773957739578336942Clostridium botulinum A3 str. Loch Maree, complete genometransporter, CorA metal ion transporter family7e-118423
NC_012658:35500:775127751278453942Clostridium botulinum Ba4 str. 657 chromosome, complete genometransporter, CorA metal ion transporter family7e-118423
NC_010723:173280:207806207806208753948Clostridium botulinum E3 str. Alaska E43, complete genomemagnesium and cobalt transporter3e-116418
NC_010674:192951:205989205989206936948Clostridium botulinum B str. Eklund 17B, complete genomemagnesium and cobalt transporter6e-116417
NC_009706:3845039:384698238469823847923942Clostridium kluyveri DSM 555 chromosome, complete genometransporter protein2e-115415
NC_011837:3776541:377848437784843779425942Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-115415
NC_014328:85290:138868138868139809942Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Mg2+ transporter protein9e-115413
NC_015687:303810:350217350217351164948Clostridium acetobutylicum DSM 1731 chromosome, complete genomemagnesium/cobalt transporter CorA2e-113409
NC_003030:303812:350221350221351168948Clostridium acetobutylicum ATCC 824, complete genomeMagnesium and cobalt transporter2e-113409
NC_008261:3014373:302553330255333026477945Clostridium perfringens ATCC 13124, complete genomeputative cation transporter6e-112404
NC_003366:2788268:280289328028932803837945Clostridium perfringens str. 13, complete genomeprobable transport protein6e-112404
NC_008262:2649289:266734826673482668292945Clostridium perfringens SM101, complete genomemagnesium and cobalt transporter5e-112404
NC_016894:377446:386766386766387695930Acetobacterium woodii DSM 1030 chromosome, complete genomemagnesium and cobalt transporter CorA12e-80299
NC_015275:3976631:399481339948133995748936Clostridium lentocellum DSM 5427 chromosome, complete genomeMg2 transporter protein CorA family protein2e-77289
NC_015052:1313311:131725813172581318208951Bifidobacterium longum subsp. infantis 157F, complete genomemagnesium and cobalt transport protein2e-65249
NC_012781:379200:380997380997381938942Eubacterium rectale ATCC 33656, complete genomeMg2+ and Co2+ transporter9e-61233
NC_013520:1905554:192383319238331924786954Veillonella parvula DSM 2008, complete genomeMg2 transporter protein CorA family protein1e-60233
NC_017068:1852708:185979318597931860746954Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative magnesium and cobalt transporter7e-60231
NC_014960:1697818:172126917212691722201933Anaerolinea thermophila UNI-1, complete genomemagnesium transporter protein1e-57223
NC_015164:2305415:230541523054152306341927Bacteroides salanitronis DSM 18170 chromosome, complete genomeMg2 transporter protein CorA family protein1e-46187
NC_016940:190986:211009211009211956948Saprospira grandis str. Lewin chromosome, complete genomeMg2 transporter protein CorA family protein8e-37154
NC_014122:143446:143446143446144390945Methanocaldococcus infernus ME chromosome, complete genomemagnesium and cobalt transport protein CorA2e-22106
NC_013887:1601730:160281616028161603769954Methanocaldococcus sp. FS406-22 chromosome, complete genomemagnesium and cobalt transport protein CorA4e-22105
NC_008527:611836:630539630539631420882Lactococcus lactis subsp. cremoris SK11, complete genomeMg2+ and Co2+ transporter8e-22104
NC_000909:963984:965086965086966039954Methanocaldococcus jannaschii DSM 2661, complete genomemagnesium and cobalt transport protein (corA)1e-20100
NC_013156:1182609:118260911826091183562954Methanocaldococcus fervens AG86, complete genomemagnesium and cobalt transport protein CorA6e-2098.2
NC_010999:2059738:206699420669942067902909Lactobacillus casei, complete genomeMagnesium transporter (Magnesium transporter CorA)1e-1894.4
NC_015379:2751342:276124927612492762199951Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative cation transporter, membrane protein7e-1271.6
NC_007492:2994036:299681429968142997737924Pseudomonas fluorescens PfO-1, complete genomeMg2+ transporter protein, CorA-like2e-1170.1
NC_009656:115390:134256134256135224969Pseudomonas aeruginosa PA7 chromosome, complete genomemagnesium and cobalt transport protein CorA6e-1065.1