Pre_GI: BLASTP Hits

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Query: NC_008593:2250871:2259659 Clostridium novyi NT, complete genome

Start: 2259659, End: 2260279, Length: 621

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014328:3482980:349087734908773491494618Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobalt-precorrin-6Y C(5)-methyltransferase1e-55216
NC_021182:1245692:125783312578331258570738Clostridium pasteurianum BC1, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit3e-54211
NC_003366:1427785:142778514277851428396612Clostridium perfringens str. 13, complete genomeprecorrin-6Y methylase2e-53208
NC_004557:749330:7605677605677617811215Clostridium tetani E88, complete genomeprecorrin-6B methylase/decarboxylase cbiT/cbiE3e-52204
NC_014633:442755:469171469171469800630Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceprecorrin-6Y C5,15-methyltransferase9e-31133
NC_013517:1055854:109592510959251096548624Sebaldella termitidis ATCC 33386, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit7e-28123
NC_013316:3863728:388431338843133884921609Clostridium difficile R20291, complete genomeputative cobalt-precorrin-6y C(5)-methyltransferase4e-27121
NC_009089:3998347:401890940189094019517609Clostridium difficile 630, complete genomeprobable cobalt-precorrin-6y C(5)-methyltransferase1e-26119
NC_014734:3086165:309627730962773096936660Paludibacter propionicigenes WB4 chromosome, complete genomeprecorriN-6y c5,15-methyltransferase (decarboxylating), cbie subunit4e-26117
NC_010001:1702350:1719119171911917210861968Clostridium phytofermentans ISDg, complete genomeprecorrin-6x reductase2e-25115
NC_009633:74500:927539275393373621Alkaliphilus metalliredigens QYMF chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase subunit CbiE1e-24112
NC_016791:1132451:1149200114920011504081209Clostridium sp. BNL1100 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE/precorrin-6Y C5,15-methyltransferase subunit CbiT9e-22103
NC_015636:1061736:108212510821251082742618Methanothermococcus okinawensis IH1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE2e-21102
NC_011898:1558208:1585938158593815871251188Clostridium cellulolyticum H10, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit5e-21100
NC_007681:1608223:163099416309941631617624Methanosphaera stadtmanae DSM 3091, complete genomeCbiE3e-1995.1
NC_011149:2040396:206692620669262067531606Salmonella enterica subsp. enterica serovar Agona str. SL483,precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit7e-1993.6
NC_015519:488550:489620489620490261642Tepidanaerobacter sp. Re1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE9e-1890.1
NC_011094:2061000:208861420886142089219606Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt-precorrin-6Y C(5)-methyltransferase6e-1787.4
NC_016627:4203775:4212079421207942132781200Clostridium clariflavum DSM 19732 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit9e-1787
NC_015565:624298:634393634393635019627Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeprecorrin-6y C5,15-methyltransferase , CbiE subunit1e-1686.7
NC_017068:1788235:181783618178361818507672Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative cobalt-precorrin-6Y C(5)-methyltransferase1e-1686.7
NC_005126:3485330:349580034958003496402603Photorhabdus luminescens subsp. laumondii TTO1, complete genomeprecorrin-6B methylase1e-1686.3
NC_012962:1827000:183477418347741835376603Photorhabdus asymbiotica, complete genomesynthesis of vitamin b12 adenosyl cobalamide2e-1685.9
NC_019903:1058657:1063940106394010651721233Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,precorrin-6y C5,15-methyltransferase subunit CbiE/precorrin-6Y C5,15-methyltransferase subunit CbiT2e-1685.5
NC_012491:1263469:1276131127613112773601230Brevibacillus brevis NBRC 100599, complete genomeCbiET protein6e-1684
NC_015690:7518732:7518732751873275200091278Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCbiET protein1e-1583.2
NC_021171:415771:4244844244844256891206Bacillus sp. 1NLA3E, complete genomeCbiET protein1e-1582.8
NC_013892:853366:864258864258864878621Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt-precorrin-6Y C(5)-methyltransferase (Cobalt-precorrin-6 methyltransferase) (Cobalt-precorrin-6Y methylase)3e-1582
NC_009253:2927802:293950329395032940129627Desulfotomaculum reducens MI-1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE2e-1479.3
NC_014622:5315500:5325758532575853270141257Paenibacillus polymyxa SC2 chromosome, complete genomeprecorrin-6y c5,15-methyltransferase6e-1477.4
NC_014483:4957315:4967470496747049687261257Paenibacillus polymyxa E681 chromosome, complete genomeProbable cobalt-precorrin-6Y C(5)-methyltransferase (Cobalt-precorrin-6 methyltransferase)1e-1376.6
NC_006138:225832:2370572370572382651209Desulfotalea psychrophila LSv54, complete genomeprecorrin-6Y C5,15-methyltransferase (CobL)1e-1376.3
NC_016641:1085862:1094656109465610959121257Paenibacillus terrae HPL-003 chromosome, complete genomeprecorrin-6y c5,15-methyltransferase2e-1375.5
NC_015636:379000:395975395975396733759Methanothermococcus okinawensis IH1 chromosome, complete genomeprecorrin-3B C17-methyltransferase1e-0962.8
NC_011059:1391734:1407598140759814088001203Prosthecochloris aestuarii DSM 271, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit5e-0961.2
NC_007181:333891:343100343100343735636Sulfolobus acidocaldarius DSM 639, complete genomeprecorrin-6B methylase1e-0859.7
NC_006138:225832:239958239958240728771Desulfotalea psychrophila LSv54, complete genomeprecorrin-3B C17-methyltransferase (CobJ)6e-0857.4
NC_009633:74500:965799657997319741Alkaliphilus metalliredigens QYMF chromosome, complete genomeprecorrin-3B C(17)-methyltransferase7e-0857
NC_012589:87592:981899818998935747Sulfolobus islandicus L.S.2.15, complete genomeprecorrin-3B C17-methyltransferase9e-0857
NC_021182:1245692:126186512618651262581717Clostridium pasteurianum BC1, complete genomeprecorrin-3B C17-methyltransferase1e-0756.2
NC_013769:87582:981939819398939747Sulfolobus islandicus L.D.8.5 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase1e-0756.2
NC_012588:87592:981899818998935747Sulfolobus islandicus M.14.25 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase1e-0756.2
NC_012632:87590:981879818798933747Sulfolobus islandicus M.16.27 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase1e-0756.2
NC_017276:85380:980369803698782747Sulfolobus islandicus REY15A chromosome, complete genomeprecorrin-3B C(17)-methyltransferase1e-0756.2
NC_010001:1702350:171834817183481719076729Clostridium phytofermentans ISDg, complete genomeprecorrin-3B C17-methyltransferase2e-0755.8
NC_014328:3482980:348689334868933487615723Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobalt-precorrin-3B C(17)-methyltransferase2e-0755.8
NC_014734:3086165:310047331004733101207735Paludibacter propionicigenes WB4 chromosome, complete genomeprecorriN-3 methyltransferase1e-0653.1
NC_004557:749330:764247764247764972726Clostridium tetani E88, complete genomeprecorrin-3B C17-methyltransferase3e-0651.6
NC_014633:442755:472950472950473675726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceprecorrin-3 methyltransferase4e-0651.2
NC_008593:2250871:225583022558302256576747Clostridium novyi NT, complete genomeprecorrin-3B C17-methyltransferase5e-0651.2
NC_007355:729498:751701751701752501801Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceprecorrin-3B C17-methyltransferase6e-0650.8
NC_017276:85380:932699326993952684Sulfolobus islandicus REY15A chromosome, complete genomeprecorrin-6y C5,15-methyltransferase(decarboxylating), CbiE subunit7e-0650.4