Pre_GI: BLASTP Hits

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Query: NC_008593:196257:196257 Clostridium novyi NT, complete genome

Start: 196257, End: 197000, Length: 744

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:198315:200992200992201810819Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein1e-107389
NC_000916:31459:5142651426525651140Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase4e-1685.1
NC_000916:31459:4322743227444381212Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase5e-1581.6
NC_014408:1455851:1466636146663614677961161Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein7e-1580.9
NC_014150:2617072:2628740262874026297981059Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein2e-1479.3
NC_014408:1018448:1026328102632810275481221Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein4e-1478.6
NC_000916:31459:415174151742203687Methanothermobacter thermautotrophicus str. Delta H, completeTPR-repeat-containing protein1e-1377
NC_013156:154233:165112165112166050939Methanocaldococcus fervens AG86, complete genomeTPR repeat-containing protein2e-1376.6
NC_011729:1496848:1496848149684815006783831Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein1e-1376.6
NC_013887:213699:214472214472215398927Methanocaldococcus sp. FS406-22 chromosome, complete genomeTPR repeat-containing protein2e-1375.9
NC_015416:1478775:150575615057561506712957Methanosaeta concilii GP-6 chromosome, complete genomeTPR repeat-containing protein5e-1374.7
NC_014734:1757995:1760036176003617618111776Paludibacter propionicigenes WB4 chromosome, complete genometetratricopeptide tpr_1 repeat-containing protein7e-1374.3
NC_014408:1455851:146554814655481466171624Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein1e-1273.6
NC_008820:2512518:2522419252241925245392121Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein3e-1272.4
NC_010793:1158279:1170884117088411720291146Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_074e-1272
NC_010793:1508974:1515258151525815164031146Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_094e-1272
NC_014150:2617072:2624435262443526262881854Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein4e-1271.6
NC_013926:511674:5191135191135209031791Aciduliprofundum boonei T469 chromosome, complete genomeTPR repeat-containing protein7e-1270.9
NC_019908:121178:1211781211781230281851Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein3e-1168.9
NC_014502:113839:1316541316541330571404Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequence3e-1168.9
NC_019942:112182:1333601333601351501791Aciduliprofundum sp. MAR08-339, complete genometetratricopeptide repeat protein3e-1168.9
NC_014330:505412:5417245417245435741851Brachyspira pilosicoli 95/1000 chromosome, complete genomehypothetical protein3e-1168.9
NC_011894:2503639:2517451251745125199072457Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p205e-1168.2
NC_015425:1687050:170901517090151709941927Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein5e-1168.2
NC_012225:2834642:2847047284704728484081362Brachyspira hyodysenteriae WA1, complete genomeTPR domain-containing protein7e-1167.8
NC_014355:3398033:3425448342544834271331686Candidatus Nitrospira defluvii, complete genomehypothetical protein7e-1167.8
NC_011894:3029964:3038773303877330411272355Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p201e-1067
NC_008312:2511500:2521887252188725236711785Trichodesmium erythraeum IMS101, complete genomeTPR repeat3e-1065.9
NC_018607:895204:910760910760911716957Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein2e-1065.9
NC_012225:2834642:2842390284239028442431854Brachyspira hyodysenteriae WA1, complete genomehypothetical protein3e-1065.5
NC_010511:637214:6417186417186448883171Methylobacterium sp. 4-46 chromosome, complete genomepeptidase C14 caspase catalytic subunit p203e-1065.5
NC_015416:2926236:294481129448112945602792Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein4e-1065.1
NC_014150:2617072:2626326262632626285782253Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein6e-1064.7
NC_012225:2834642:2844286284428628467392454Brachyspira hyodysenteriae WA1, complete genomeputative TPR domain-containing protein6e-1064.7
NC_015416:2113949:2133355213335521348121458Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein7e-1064.3
NC_003454:249304:2679022679022697881887Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTetratricopeptide repeat family protein7e-1064.3
NC_010793:416849:4226024226024237411140Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_037e-1064.3
NC_012440:1841315:1861196186119618622331038Persephonella marina EX-H1, complete genomeTPR Domain containing protein9e-1063.9
NC_012563:1348500:135254313525431353454912Clostridium botulinum A2 str. Kyoto, complete genometetratricopeptide repeat family protein1e-0963.5
NC_019908:2183215:2187826218782621906032778Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein1e-0963.2
NC_000909:858840:869478869478870434957Methanocaldococcus jannaschii DSM 2661, complete genometransformation sensitive protein2e-0963.2
NC_013851:2211120:2230538223053822329342397Allochromatium vinosum DSM 180 chromosome, complete genomeMethyltransferase type 112e-0962.8
NC_014836:2723060:2741597274159727435581962Desulfurispirillum indicum S5 chromosome, complete genometetratricopeptide repeat-containing protein2e-0962.8
NC_011894:2549076:2561841256184125649093069Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p202e-0962.8
NC_009488:1917000:1931709193170919328481140Orientia tsutsugamushi str. Boryong, complete genomehypothetical protein3e-0962.4
NC_007110:1:2381323813262602448Rickettsia felis URRWXCal2 plasmid pRF, complete sequenceATP-dependent protease La, bacterial type3e-0962.4
NC_017297:1280963:128318612831861284097912Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein3e-0962.4
NC_014150:1523108:1544520154452015456951176Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein3e-0962.4
NC_011894:7421867:7434437743443774374032967Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p205e-0961.6
NC_008820:2512518:2518732251873225201201389Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-0961.6
NC_019977:1245894:1262204126220412649452742Methanomethylovorans hollandica DSM 15978, complete genomeputative endonuclease related to Holliday junction resolvase5e-0961.6
NC_015416:223968:241305241305242090786Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein4e-0961.6
NC_009485:7626677:7641362764136276425191158Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein7e-0961.2
NC_011894:6295807:6299486629948663026563171Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p206e-0961.2
NC_008312:2264832:2281661228166122831211461Trichodesmium erythraeum IMS101, complete genomeTPR repeat6e-0961.2
NC_015416:2967511:296825929682592969107849Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein6e-0961.2
NC_010793:1811401:1862337186233718634761140Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_109e-0960.8
NC_007335:672847:689264689264690235972Prochlorococcus marinus str. NATL2A, complete genomeTPR repeat1e-0860.5
NC_005071:1903581:1913984191398419164732490Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat:HAT (Half-A-TPR) repeat1e-0860.5
NC_005071:288922:3365573365573397303174Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat1e-0860.5
NC_015164:3431279:343616534361653437088924Bacteroides salanitronis DSM 18170 chromosome, complete genomeTetratricopeptide TPR_2 repeat-containing protein1e-0860.1
NC_010793:668500:684528684528685319792Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 051e-0860.1
NC_011244:213853:2248602248602272052346Borrelia recurrentis A1, complete genomesurface-located membrane protein 13e-0858.9
NC_019972:145617:167123167123167740618Methanomethylovorans hollandica DSM 15978 plasmid pMETHO01,cytochrome c biogenesis factor3e-0858.9
NC_014122:549932:5945525945525961561605Methanocaldococcus infernus ME chromosome, complete genomeTPR repeat-containing protein4e-0858.5
NC_015510:6373937:6396170639617063972611092Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein6e-0858.2
NC_002689:46243:462434624346971729Thermoplasma volcanium GSS1, complete genomeTPR-repeat-containing protein6e-0857.8
NC_013730:2403930:2403930240393024050331104Spirosoma linguale DSM 74, complete genomeTetratricopeptide TPR_2 repeat protein1e-0757.4
NC_015416:2967511:2971720297172029729821263Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein1e-0757.4
NC_000909:858840:8704248704248714401017Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein1e-0757
NC_012491:743883:7718427718427740372196Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-0757
NC_010673:205500:2121372121372144912355Borrelia hermsii DAH, complete genomesurface-located membrane protein 11e-0757
NC_009925:647752:6545326545326562021671Acaryochloris marina MBIC11017, complete genomepeptidase, M50 family2e-0756.2
NC_015574:391869:3962693962693974021134Methanobacterium sp. SWAN-1 chromosome, complete genomehypothetical protein2e-0756.2
NC_015416:2967511:299198329919832992864882Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein3e-0755.8
NC_014733:1073540:1094406109440610961061701Methylovorus sp. MP688 chromosome, complete genometetratricopeptide tpr_2 repeat protein3e-0755.8
NC_014150:446359:4477844477844498382055Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein3e-0755.5
NC_019907:1454554:1457995145799514602082214Liberibacter crescens BT-1 chromosome, complete genomehypothetical protein4e-0755.5
NC_008255:1500067:1519865151986515214121548Cytophaga hutchinsonii ATCC 33406, complete genomeTPR repeat-containing protein5e-0755.1
NC_015416:2967511:2969284296928429706901407Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein4e-0755.1
NC_017243:1197586:1200284120028412015581275Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein4e-0755.1
NC_008312:2264832:2264832226483222700455214Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, family 28e-0754.3
NC_015416:2926236:2941252294125229426971446Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein1e-0653.9
NC_014972:1035124:1045768104576810479032136Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTPR repeat-containing protein1e-0653.9
NC_000911:1718820:173913017391301740020891Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0653.9
NC_017039:1717848:173815817381581739048891Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-0653.9
NC_017052:1717836:173814617381461739036891Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-0653.9
NC_017277:1717637:173794717379471738837891Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0653.9
NC_014150:1902241:1902241190224119045172277Brachyspira murdochii DSM 12563 chromosome, complete genomeTetratricopeptide TPR_2 repeat protein1e-0653.9
NC_013851:2211120:2226033222603322279311899Allochromatium vinosum DSM 180 chromosome, complete genomeTPR repeat-containing protein9e-0753.9
NC_013156:573037:593217593217594089873Methanocaldococcus fervens AG86, complete genomeTetratricopeptide TPR_2 repeat protein1e-0653.5
NC_019757:5085648:508564850856485086454807Cylindrospermum stagnale PCC 7417, complete genomeTfp pilus assembly protein PilF2e-0653.1
NC_009515:616432:6317176317176328531137Methanobrevibacter smithii ATCC 35061, complete genomeO-linked GlcNAc transferase2e-0653.1
NC_008312:7099417:7112497711249771138551359Trichodesmium erythraeum IMS101, complete genomeTPR repeat2e-0652.8
NC_009488:681000:694297694297695271975Orientia tsutsugamushi str. Boryong, complete genomehypothetical protein2e-0652.8
NC_007677:3316540:3338786333878633404501665Salinibacter ruber DSM 13855, complete genomeTPR repeat protein2e-0652.8
NC_009425:63709:9147091470935632094Enterobacter sp. 638 plasmid pENTE01, complete sequenceTPR repeat-containing protein2e-0652.8
NC_015574:868000:872354872354872845492Methanobacterium sp. SWAN-1 chromosome, complete genomehypothetical protein2e-0652.8
NC_008593:1513107:152951815295181530456939Clostridium novyi NT, complete genomeconserved protein, tetratricopeptide repeat family protein2e-0652.8
NC_003552:2674385:270020827002082701050843Methanosarcina acetivorans C2A, complete genomehypothetical protein3e-0652.4
NC_011059:921690:923335923335923934600Prosthecochloris aestuarii DSM 271, complete genomeTetratricopeptide TPR_2 repeat protein3e-0652.4
NC_010674:1170264:117203011720301172956927Clostridium botulinum B str. Eklund 17B, complete genomeconserved protein, tetratricopeptide repeat family protein3e-0652.4
NC_015416:2926236:2939729293972929412071479Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein3e-0652.4
NC_010723:1133163:113591911359191136845927Clostridium botulinum E3 str. Alaska E43, complete genomeconserved protein, tetratricopeptide repeat family protein4e-0652
NC_008820:1659612:1678311167831116811212811Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein4e-0651.6
NC_007110:1:148651486515629765Rickettsia felis URRWXCal2 plasmid pRF, complete sequenceTPR, tetratricopeptide repeat domain6e-0651.2
NC_009464:650997:657893657893658825933Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein9e-0650.8