Pre_GI: BLASTP Hits

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Query: NC_008593:1631438:1649289 Clostridium novyi NT, complete genome

Start: 1649289, End: 1650596, Length: 1308

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1867620:1888467188846718898191353Clostridium botulinum BKT015925 chromosome, complete genomebranched-chain amino acid transport system II carrier protein0636
NC_014377:149288:1539801539801552811302Thermosediminibacter oceani DSM 16646 chromosome, complete genomebranched-chain amino acid transport system II carrier protein2e-96352
NC_014377:149288:1524711524711537721302Thermosediminibacter oceani DSM 16646 chromosome, complete genomebranched-chain amino acid transport system II carrier protein1e-94347
NC_010516:3545017:3562910356291035642321323Clostridium botulinum B1 str. Okra, complete genomebranched-chain amino acid transport system II carrier protein2e-85316
NC_009495:3502000:3502001350200135033231323Clostridium botulinum A str. ATCC 3502 chromosome, complete genomebranched chain amino acid ABC transporter carrier protein2e-85316
NC_009697:3463736:3477989347798934793111323Clostridium botulinum A str. ATCC 19397 chromosome, completebranched-chain amino acid transport system II carrier protein2e-85316
NC_009698:3359766:3375097337509733764191323Clostridium botulinum A str. Hall chromosome, complete genomebranched-chain amino acid transport system II carrier protein2e-85316
NC_017297:3594000:3594250359425035955721323Clostridium botulinum F str. 230613 chromosome, complete genomebranched-chain amino acid transport system II carrier protein4e-85315
NC_009699:3581376:3595634359563435969561323Clostridium botulinum F str. Langeland chromosome, complete genomebranched-chain amino acid transport system II carrier protein4e-85315
NC_012563:3729817:3744057374405737453971341Clostridium botulinum A2 str. Kyoto, complete genomebranched-chain amino acid transport system II carrier protein3e-82305
NC_020244:2509000:2542390254239025437121323Bacillus subtilis XF-1, complete genomelow-affinity branched-chain amino acid transporter5e-74278
NC_019896:1483073:1498446149844614997681323Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeBranched-chain amino acid transport system carrier protein BrnQ1e-73277
NC_010520:3580000:3580008358000835811981191Clostridium botulinum A3 str. Loch Maree, complete genomebranched-chain amino acid transport system II carrier protein8e-71268
NC_003454:677699:6894806894806907541275Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBranched-chain amino acid transport system carrier protein4e-64245
NC_004193:375416:4475254475254488771353Oceanobacillus iheyensis HTE831, complete genomebranched-chain amino acid transporter4e-63242
NC_015633:2565753:2610211261021126115241314Vibrio anguillarum 775 chromosome chromosome I, complete sequenceBranched chain amino acid transport1e-61237
NC_012779:2928000:2928202292820229295721371Edwardsiella ictaluri 93-146, complete genomebranched-chain amino acid transport system II carrier protein, putative1e-57224
NC_016052:2201211:2203730220373022050791350Tetragenococcus halophilus NBRC 12172, complete genomebranched-chain amino acid transport system carrier protein1e-57223
NC_014554:337268:3548503548503562261377Lactobacillus plantarum subsp. plantarum ST-III chromosome,LIVCS family branched chain amino acid:cation symporter1e-52207
NC_004567:343500:3623983623983637741377Lactobacillus plantarum WCFS1, complete genomebranched-chain amino acid transport protein1e-52207
NC_016782:1745374:1764369176436917656731305Corynebacterium diphtheriae 241 chromosome, complete genomebranched-chain amino acid uptake carrier9e-52204
NC_016786:1751204:1764969176496917662731305Corynebacterium diphtheriae HC01 chromosome, complete genomebranched-chain amino acid uptake carrier9e-52204
NC_016799:1787687:1804265180426518055691305Corynebacterium diphtheriae 31A chromosome, complete genomebranched-chain amino acid uptake carrier2e-51203
NC_016790:1702856:1716620171662017179241305Corynebacterium diphtheriae VA01 chromosome, complete genomebranched-chain amino acid uptake carrier2e-51203
NC_016788:1730458:1744223174422317455271305Corynebacterium diphtheriae HC04 chromosome, complete genomebranched-chain amino acid uptake carrier2e-51203
NC_016787:1726978:1740743174074317420471305Corynebacterium diphtheriae HC03 chromosome, complete genomebranched-chain amino acid uptake carrier2e-51203
NC_002935:1763886:1779545177954517808491305Corynebacterium diphtheriae NCTC 13129, complete genomebranched-chain amino acid ABC transport system membrane protein3e-51202
NC_016783:1758319:1772095177209517733991305Corynebacterium diphtheriae INCA 402 chromosome, complete genomebranched-chain amino acid uptake carrier3e-51202
NC_016801:1782401:1796164179616417974681305Corynebacterium diphtheriae C7 (beta) chromosome, complete genomebranched-chain amino acid uptake carrier3e-51202
NC_016802:1709840:1728807172880717301111305Corynebacterium diphtheriae HC02 chromosome, complete genomebranched-chain amino acid uptake carrier3e-51202
NC_015428:193817:2055082055082069111404Lactobacillus buchneri NRRL B-30929 chromosome, complete genomebranched-chain amino acid transport system II carrier protein9e-49194
NC_016628:133841:1338411338411351421302Vibrio furnissii NCTC 11218 chromosome 2, complete sequencebranched-chain amino acid transport system II carrier protein2e-48193
NC_016789:1805503:1819265181926518204731209Corynebacterium diphtheriae PW8 chromosome, complete genome2e-48193
NC_007622:271673:2930092930092943161308Staphylococcus aureus RF122, complete genomeprobable branched-chain amino acid transport system II carrier protein7e-48191
NC_012913:1867276:1885944188594418872721329Aggregatibacter aphrophilus NJ8700, complete genomebranched-chain amino acid transport system II carrier protein1e-47191
NC_004461:205068:2075332075332088911359Staphylococcus epidermidis ATCC 12228, complete genomebranched-chain amino acid transport system carrier protein2e-45183
NC_012470:1635516:1639580163958016409291350Streptococcus equi subsp. zooepidemicus, complete genomebranched-chain amino acid transport system carrier protein5e-45182
NC_015167:1666000:1689690168969016909791290Cellulophaga lytica DSM 7489 chromosome, complete genomebranched-chain amino acid transport system II carrier protein7e-45181
NC_011134:533679:5521095521095534521344Streptococcus equi subsp. zooepidemicus str. MGCS10565, completebranched-chain amino acid transport system carrier protein BraB4e-44179
NC_015516:131564:155955155955156614660Melissococcus plutonius ATCC 35311, complete genomebranched-chain amino acid transport system carrier protein3e-29129
NC_015516:131564:155478155478155954477Melissococcus plutonius ATCC 35311, complete genomebranched-chain amino acid transport system carrier protein1e-0655.1