Pre_GI: BLASTP Hits

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Query: NC_008593:1631438:1647025 Clostridium novyi NT, complete genome

Start: 1647025, End: 1647543, Length: 519

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1867620:188629018862901886847558Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein5e-70263
NC_015634:2779392:278022627802262780744519Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein6e-42169
NC_014376:1217000:123133712313371231891555Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein7e-32136
NC_014376:1217000:123761812376181238154537Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein8e-31132
NC_010723:2873886:287388628738862874431546Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein3e-26117
NC_010674:3049500:304961730496173050162546Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein8e-26116
NC_014654:2138794:215951221595122160054543Halanaerobium sp. 'sapolanicus' chromosome, complete genomesignal transduction histidine kinase, LytS8e-1786.3
NC_012984:3077004:308577030857703086318549Lactobacillus plantarum JDM1, complete genomeintegral membrane protein7e-1683.2
NC_010003:2029416:203586220358622036398537Petrotoga mobilis SJ95, complete genomehypothetical protein3e-1167.8
NC_016630:28410:319073190732641735Filifactor alocis ATCC 35896 chromosome, complete genomehypothetical protein1e-0652.4
NC_014760:925933:9287379287379297441008Mycoplasma bovis PG45 chromosome, complete genomemembrane protein9e-0649.7