Pre_GI: BLASTP Hits

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Query: NC_008593:1631438:1631438 Clostridium novyi NT, complete genome

Start: 1631438, End: 1632130, Length: 693

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1867620:187081418708141871509696Clostridium botulinum BKT015925 chromosome, complete genomephosphodiesterase9e-98356
NC_015589:2100175:211899121189912119707717Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemetallophosphoesterase1e-50199
NC_017095:269165:276908276908277711804Fervidobacterium pennivorans DSM 9078 chromosome, complete genomephosphoesterase1e-37156
NC_009718:518873:518873518873519652780Fervidobacterium nodosum Rt17-B1, complete genomephosphodiesterase4e-36151
NC_005042:1422000:142791214279121428727816Prochlorococcus marinus subsp. marinus str. CCMP1375, completePredicted calcineurin family phosphoesterase6e-34144
NC_019942:1078837:108184510818451082513669Aciduliprofundum sp. MAR08-339, complete genomephosphoesterase, MJ0936 family2e-31135
NC_003413:1521080:152040515204051521097693Pyrococcus furiosus DSM 3638, complete genomehypothetical protein2e-31135
NC_013926:1009718:103007010300701030738669Aciduliprofundum boonei T469 chromosome, complete genomephosphodiesterase, MJ0936 family3e-30132
NC_007516:1439537:144032214403221441137816Synechococcus sp. CC9605, complete genomehypothetical protein2e-29129
NC_000868:500249:520758520758521459702Pyrococcus abyssi GE5, complete genomehypothetical protein2e-29128
NC_013665:1865122:188220618822061882871666Methanocella paludicola SANAE, complete genomeputative phosphoesterase5e-28124
NC_014002:809816:829936829936830646711Methanohalophilus mahii DSM 5219 chromosome, complete genomephosphodiesterase, MJ0936 family6e-27120
NC_011026:2533017:254044025404402541180741Chloroherpeton thalassium ATCC 35110, complete genomemetallophosphoesterase2e-26119
NC_020388:486803:504484504484505155672Natronomonas moolapensis 8.8.11 complete genomeMJ0936 family phosphoesterase3e-26118
NC_007498:1774859:178296117829611783638678Pelobacter carbinolicus DSM 2380, complete genomepredicted phosphoesterase4e-26118
NC_008148:2290806:230424523042452305006762Rubrobacter xylanophilus DSM 9941, complete genomemetallophosphoesterase3e-24112
NC_011661:1100576:110577811057781106509732Dictyoglomus turgidum DSM 6724, complete genomemetallophosphoesterase3e-24111
NC_000854:723000:725116725116725871756Aeropyrum pernix K1, complete genomehypothetical protein4e-23108
NC_013665:1865122:188296918829691883664696Methanocella paludicola SANAE, complete genomeputative phosphoesterase4e-22105
NC_013282:1842412:185956918595691860303735Cronobacter turicensis, complete genomehypothetical protein1e-21103
NC_013946:2854219:287284828728482873762915Meiothermus ruber DSM 1279 chromosome, complete genomemetallophosphoesterase3e-21102
NC_014633:655693:670413670413671144732Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencemetallophosphoesterase4e-21101
NC_009802:1525144:154459315445931545276684Campylobacter concisus 13826, complete genomeSer/Thr protein phosphatase family protein3e-2099
NC_009255:213245:218598218598219332735Burkholderia vietnamiensis G4 chromosome 2, complete sequencemetallophosphoesterase3e-1892
NC_019942:1370872:138401013840101384714705Aciduliprofundum sp. MAR08-339, complete genomephosphoesterase, MJ0936 family1e-1790.1
NC_009659:2523874:254688425468842547585702Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein2e-1686.3
NC_013410:1203937:122085012208501221578729Fibrobacter succinogenes subsp. succinogenes S85 chromosome,metallophosphoesterase3e-1685.5
NC_014221:1932903:195282619528261953596771Truepera radiovictrix DSM 17093 chromosome, complete genomemetallophosphoesterase4e-1685.1
NC_011831:1336779:136290613629061363754849Chloroflexus aggregans DSM 9485, complete genomemetallophosphoesterase5e-1684.7
NC_012881:4023895:402837640283764029065690Desulfovibrio salexigens DSM 2638, complete genomemetallophosphoesterase1e-1583.6
NC_002927:118982:128487128487129164678Bordetella bronchiseptica RB50, complete genomeputative phosphoesterase1e-1480.1
NC_008786:3845988:386104138610413861796756Verminephrobacter eiseniae EF01-2, complete genomebis(5'nucleosyl)-tetraphosphatase, ApaH5e-1168.2
NC_021175:997618:100230810023081003135828Streptococcus oligofermentans AS 1.3089, complete genomeSer/Thr protein phosphatase family protein5e-1064.7
NC_009718:1272296:127409312740931274683591Fervidobacterium nodosum Rt17-B1, complete genomephosphodiesterase1e-0653.5
NC_011653:1463743:148041414804141480968555Thermosipho africanus TCF52B, complete genomephosphodiesterase, family2e-0652.8