Pre_GI: BLASTP Hits

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Query: NC_008593:1513107:1530532 Clostridium novyi NT, complete genome

Start: 1530532, End: 1531233, Length: 702

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1687050:171003017100301710731702Clostridium botulinum BKT015925 chromosome, complete genomepurine nucleoside phosphorylase7e-116416
NC_015555:863173:877016877016877717702Thermoanaerobacterium xylanolyticum LX-11 chromosome, completePurine nucleoside phosphorylase deoD-type7e-94343
NC_019970:1991944:199540819954081996109702Thermoanaerobacterium thermosaccharolyticum M0795, complete genomepurine-nucleoside phosphorylase, DeoD family8e-93339
NC_009617:4761000:476540447654044766117714Clostridium beijerinckii NCIMB 8052 chromosome, complete genomepurine nucleoside phosphorylase6e-86317
NC_020291:1810527:182557518255751826288714Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomepurine nucleoside phosphorylase DeoD-type3e-85314
NC_010723:2873886:287748128774812878191711Clostridium botulinum E3 str. Alaska E43, complete genomepurine nucleoside phosphorylase3e-85314
NC_010674:3049500:305409230540923054802711Clostridium botulinum B str. Eklund 17B, complete genomepurine nucleoside phosphorylase6e-85313
NC_015577:3244857:324972932497293250433705Treponema azotonutricium ZAS-9 chromosome, complete genomepurine nucleoside phosphorylase1e-79295
NC_013517:1916020:193030819303081931006699Sebaldella termitidis ATCC 33386, complete genomepurine nucleoside phosphorylase4e-78290
NC_014391:6640327:664819866481986648905708Micromonospora aurantiaca ATCC 27029 chromosome, complete genomepurine nucleoside phosphorylase8e-70263
NC_014815:2639339:264236826423682643075708Micromonospora sp. L5 chromosome, complete genomepurine nucleoside phosphorylase8e-70263
NC_014837:3633378:366009536600953660808714Pantoea sp. At-9b chromosome, complete genomepurine nucleoside phosphorylase4e-69261
NC_013956:3641368:367133436713343672047714Pantoea ananatis LMG 20103 chromosome, complete genomeDeoD4e-69261
NC_016816:792460:792460792460793173714Pantoea ananatis LMG 5342, complete genomepurine nucleoside phosphorylase DeoD-type5e-69260
NC_020260:3277007:329976132997613300480720Cronobacter sakazakii Sp291, complete genomepurine nucleoside phosphorylase2e-68258
NC_009778:3287693:330858533085853309304720Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-68258
NC_014618:4010689:403479440347944035516723Enterobacter cloacae SCF1 chromosome, complete genomepurine nucleoside phosphorylase9e-66249
NC_009617:3647500:365610336561033656816714Clostridium beijerinckii NCIMB 8052 chromosome, complete genomepurine nucleoside phosphorylase2e-64245
NC_008532:973510:995355995355996065711Streptococcus thermophilus LMD-9, complete genomePurine-nucleoside phosphorylase6e-64243
NC_020291:5093138:510736951073695108082714Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomepurine nucleoside phosphorylase DeoD-type2e-63242
NC_015152:1341353:136048013604801361187708Spirochaeta sp. Buddy chromosome, complete genomepurine nucleoside phosphorylase3e-60231
NC_009348:3261500:326462632646263265327702Aeromonas salmonicida subsp. salmonicida A449, complete genomepurine nucleoside phosphorylase4e-60231
NC_016627:1960097:197511219751121975822711Clostridium clariflavum DSM 19732 chromosome, complete genomepurine-nucleoside phosphorylase, DeoD family3e-57221
NC_015437:918614:932493932493933206714Selenomonas sputigena ATCC 35185 chromosome, complete genomepurine nucleoside phosphorylase6e-57220
NC_020418:3133831:315522731552273155934708Morganella morganii subsp. morganii KT, complete genomePurine nucleoside phosphorylase1e-56219
NC_017259:523840:552105552105552809705Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,purine nucleoside phosphorylase6e-56217
NC_009012:1901492:190411719041171904827711Clostridium thermocellum ATCC 27405, complete genomepurine nucleoside phosphorylase3e-55214
NC_017378:1175639:117563911756391176340702Helicobacter pylori Puno120 chromosome, complete genomepurine-nucleoside phosphorylase9e-50196
NC_017379:1233482:123348212334821234186705Helicobacter pylori Puno135 chromosome, complete genomepurine-nucleoside phosphorylase7e-49193
NC_015500:2329957:235783223578322358554723Treponema brennaborense DSM 12168 chromosome, complete genomepurine nucleoside phosphorylase5e-38157
NC_006055:769418:771767771767772474708Mesoplasma florum L1, complete genomepurine-nucleoside phosphorylase1e-37156
NC_011025:183287:221648221648222364717Mycoplasma arthritidis 158L3-1, complete genomepurine nucleoside phosphorylase5e-36150
NC_015435:570980:592764592764593426663Metallosphaera cuprina Ar-4 chromosome, complete genomepurine phosphorylase family 14e-23108
NC_011766:755000:773515773515774237723Desulfurococcus kamchatkensis 1221n chromosome, complete genomepurine and other phosphorylase, family 11e-22106
NC_014330:1957725:197124719712471972047801Brachyspira pilosicoli 95/1000 chromosome, complete genomeuridine phosphorylase4e-2098.2
NC_019908:1296870:129687012968701297670801Brachyspira pilosicoli P43/6/78 chromosome, complete genomeuridine phosphorylase5e-2097.8
NC_014614:432000:442566442566443309744Clostridium sticklandii, complete genomePurine or other phosphorylase family 11e-1996.3
NC_009617:3647500:365925136592513660036786Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeuridine phosphorylase2e-1996.3
NC_014150:1123570:113571411357141136529816Brachyspira murdochii DSM 12563 chromosome, complete genomepurine or other phosphorylase family 12e-1892.4
NC_014212:3091571:310947231094723110239768Meiothermus silvanus DSM 9946 chromosome, complete genomepurine or other phosphorylase family 17e-1890.9
NC_020291:5093138:511051151105115111287777Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeuridine phosphorylase Udp9e-1890.5
NC_012225:1775264:178347017834701784288819Brachyspira hyodysenteriae WA1, complete genomeuridine phosphorylase1e-1790.1
NC_017243:314000:325083325083325901819Brachyspira intermedia PWS/A chromosome, complete genomeuridine phosphorylase1e-1790.1
NC_009831:4447919:445431044543104455041732Shewanella sediminis HAW-EB3, complete genomeuridine phosphorylase3e-1789
NC_014330:1957725:197205619720561972859804Brachyspira pilosicoli 95/1000 chromosome, complete genomeuridine phosphorylase2e-1789
NC_013421:4714478:477100847710084771778771Pectobacterium wasabiae WPP163, complete genomeuridine phosphorylase4e-1788.2
NC_016745:1548426:156504515650451565803759Oceanimonas sp. GK1 chromosome, complete genomeuridine phosphorylase9e-1787
NC_016809:389561:409288409288410046759Haemophilus influenzae 10810, complete genomeuridine phosphorylase1e-1686.7
NC_013517:825100:830359830359831111753Sebaldella termitidis ATCC 33386, complete genomeuridine phosphorylase2e-1686.3
NC_011740:3739395:374315937431593743929771Escherichia fergusonii ATCC 35469, complete genomeuridine phosphorylase3e-1685.1
NC_014374:318528:339294339294339986693Acidilobus saccharovorans 345-15 chromosome, complete genomepurine and other phosphorylases, family 14e-1684.7
NC_012912:4428111:445015644501564450917762Dickeya zeae Ech1591, complete genomeuridine phosphorylase2e-1582.4
NC_014150:1123570:113492011349201135711792Brachyspira murdochii DSM 12563 chromosome, complete genomepurine or other phosphorylase family 13e-1582
NC_017243:314000:324279324279325064786Brachyspira intermedia PWS/A chromosome, complete genomeuridine phosphorylase5e-1581.3
NC_007712:172000:185012185012185779768Sodalis glossinidius str. 'morsitans', complete genomeuridine phosphorylase9e-1580.5
NC_009828:1474970:149245214924521493258807Thermotoga lettingae TMO, complete genomepurine or other phosphorylase family 11e-1480.1
NC_012225:1775264:178430717843071785092786Brachyspira hyodysenteriae WA1, complete genomeuridine phosphorylase3e-1479
NC_014804:189368:209294209294210124831Thermococcus barophilus MP chromosome, complete genomeuridine phosphorylase6e-1477.8
NC_009052:4437649:445396444539644454698735Shewanella baltica OS155, complete genomepurine and other phosphorylases, family 13e-1375.5
NC_009376:1442314:144539314453931446178786Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeuridine phosphorylase4e-1375.1
NC_019791:1272850:130492213049221305761840Caldisphaera lagunensis DSM 15908 chromosome, complete genomeuridine phosphorylase5e-1374.7
NC_010999:2483000:249014024901402490883744Lactobacillus casei, complete genomeUridine phosphorylase3e-1272
NC_013199:2386924:239716823971682397920753Lactobacillus rhamnosus Lc 705, complete genomeuridine phosphorylase (UrdPase) (UPase)3e-1168.6
NC_013892:2108175:214774221477422148380639Xenorhabdus bovienii SS-2004 chromosome, complete genomepurine-nucleoside phosphorylase1e-1066.6
NC_014363:1396912:141719614171961417948753Olsenella uli DSM 7084 chromosome, complete genomepurine or other phosphorylase family 11e-0756.6
NC_012560:4201969:422995642299564230690735Azotobacter vinelandii DJ, complete genomephosphorylase7e-0754.3
NC_021150:4201965:422995242299524230686735Azotobacter vinelandii CA6, complete genomephosphorylase7e-0754.3
NC_010723:3499291:350578435057843506539756Clostridium botulinum E3 str. Alaska E43, complete genomeuridine phosphorylase1e-0653.5