Pre_GI: BLASTP Hits

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Query: NC_008593:1513107:1529518 Clostridium novyi NT, complete genome

Start: 1529518, End: 1530456, Length: 939

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1687050:170901517090151709941927Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein1e-118426
NC_017297:1280963:128318612831861284097912Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein2e-92338
NC_012563:1348500:135254313525431353454912Clostridium botulinum A2 str. Kyoto, complete genometetratricopeptide repeat family protein1e-91336
NC_020291:1266885:128657312865731287502930Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometetratricopeptide TPR_2 repeat protein7e-71267
NC_010723:1133163:113591911359191136845927Clostridium botulinum E3 str. Alaska E43, complete genomeconserved protein, tetratricopeptide repeat family protein8e-71267
NC_010674:1170264:117203011720301172956927Clostridium botulinum B str. Eklund 17B, complete genomeconserved protein, tetratricopeptide repeat family protein6e-70264
NC_008262:2150944:216092121609212161856936Clostridium perfringens SM101, complete genometetratricopeptide repeat protein1e-64247
NC_008261:2481500:249166324916632492598936Clostridium perfringens ATCC 13124, complete genometetratricopeptide repeat protein2e-64246
NC_003366:2266757:227783022778302278765936Clostridium perfringens str. 13, complete genomehypothetical protein3e-64245
NC_020134:2801199:280325928032592804206948Clostridium stercorarium subsp. stercorarium DSM 8532, completetetratricopeptide TPR_2 repeat protein3e-50198
NC_010511:637214:6417186417186448883171Methylobacterium sp. 4-46 chromosome, complete genomepeptidase C14 caspase catalytic subunit p205e-1788.6
NC_011729:1496848:1496848149684815006783831Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein1e-1584
NC_014733:1073540:1094406109440610961061701Methylovorus sp. MP688 chromosome, complete genometetratricopeptide tpr_2 repeat protein4e-1582
NC_012440:1841315:1861196186119618622331038Persephonella marina EX-H1, complete genomeTPR Domain containing protein7e-1581.6
NC_012225:2834642:2847047284704728484081362Brachyspira hyodysenteriae WA1, complete genomeTPR domain-containing protein2e-1480.1
NC_014150:2617072:2626326262632626285782253Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein2e-1479.7
NC_011894:7421867:7434437743443774374032967Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-1479.3
NC_000916:31459:4322743227444381212Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase3e-1479.3
NC_014408:1455851:1466636146663614677961161Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein4e-1479
NC_012225:2834642:2844286284428628467392454Brachyspira hyodysenteriae WA1, complete genomeputative TPR domain-containing protein1e-1377.4
NC_019908:2183215:2187826218782621906032778Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein2e-1377
NC_011894:2549076:2561841256184125649093069Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p202e-1376.6
NC_005071:288922:3365573365573397303174Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat2e-1376.6
NC_011894:2503639:2517451251745125199072457Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p206e-1375.1
NC_011894:3029964:3038773303877330411272355Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p208e-1374.7
NC_014150:2617072:2624435262443526262881854Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein8e-1374.7
NC_011894:6295807:6299486629948663026563171Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p201e-1273.9
NC_018607:895204:910760910760911716957Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein3e-1272.8
NC_019977:1245894:1262204126220412649452742Methanomethylovorans hollandica DSM 15978, complete genomeputative endonuclease related to Holliday junction resolvase4e-1272.4
NC_000909:858840:8704248704248714401017Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein5e-1272
NC_017243:1197586:1200284120028412015581275Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein5e-1272
NC_008820:1659612:1678311167831116811212811Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein7e-1271.6
NC_014150:1902241:1902241190224119045172277Brachyspira murdochii DSM 12563 chromosome, complete genomeTetratricopeptide TPR_2 repeat protein8e-1271.2
NC_014408:1018448:1026328102632810275481221Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein9e-1271.2
NC_000911:1718820:173913017391301740020891Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1170.9
NC_017039:1717848:173815817381581739048891Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-1170.9
NC_017052:1717836:173814617381461739036891Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-1170.9
NC_017277:1717637:173794717379471738837891Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1170.9
NC_008820:2512518:2522419252241925245392121Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein1e-1170.5
NC_008312:2264832:2264832226483222700455214Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, family 22e-1170.5
NC_013665:1591081:1601818160181816042352418Methanocella paludicola SANAE, complete genomehypothetical protein2e-1170.1
NC_008820:2512518:2518732251873225201201389Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein2e-1170.1
NC_005071:1903581:1911797191179719138722076Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat3e-1169.3
NC_003454:249304:2679022679022697881887Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTetratricopeptide repeat family protein3e-1169.3
NC_007677:3316540:3338786333878633404501665Salinibacter ruber DSM 13855, complete genomeTPR repeat protein3e-1169.3
NC_014150:446359:4477844477844498382055Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein5e-1168.9
NC_011027:1488455:1496721149672114983311611Chlorobaculum parvum NCIB 8327, complete genomeTPR repeat-containing protein5e-1168.6
NC_014330:505412:5417245417245435741851Brachyspira pilosicoli 95/1000 chromosome, complete genomehypothetical protein6e-1168.2
NC_015510:6373937:6396170639617063972611092Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein7e-1168.2
NC_000916:31459:5142651426525651140Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase7e-1168.2
NC_013943:2610902:2619455261945526209871533Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein8e-1168.2
NC_015672:1921023:1944158194415819457921635Flexistipes sinusarabici DSM 4947 chromosome, complete genomehypothetical protein8e-1168.2
NC_014408:1455851:146554814655481466171624Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein1e-1067.8
NC_019942:112182:1333601333601351501791Aciduliprofundum sp. MAR08-339, complete genometetratricopeptide repeat protein1e-1067.8
NC_019908:121178:1211781211781230281851Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein9e-1167.8
NC_014150:1523108:1544520154452015456951176Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein9e-1167.8
NC_015416:2967511:299198329919832992864882Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein1e-1067.4
NC_012225:2834642:2842390284239028442431854Brachyspira hyodysenteriae WA1, complete genomehypothetical protein1e-1067.4
NC_012225:2274295:2294630229463022974882859Brachyspira hyodysenteriae WA1, complete genomeTPR domain-containing protein1e-1067
NC_010625:1551430:1562657156265715652002544Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceTetratricopeptide TPR_2 repeat protein2e-1067
NC_012491:743883:7718427718427740372196Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-1066.2
NC_014758:310394:326428326428327222795Calditerrivibrio nitroreducens DSM 19672 chromosome, completetetratricopeptide tpr_1 repeat-containing protein3e-1065.9
NC_008312:2264832:2281661228166122831211461Trichodesmium erythraeum IMS101, complete genomeTPR repeat9e-1064.7
NC_010793:668500:684528684528685319792Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 057e-1064.7
NC_014150:2617072:2628740262874026297981059Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein1e-0964.3
NC_000916:31459:415174151742203687Methanothermobacter thermautotrophicus str. Delta H, completeTPR-repeat-containing protein1e-0964.3
NC_005071:1903581:1913984191398419164732490Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat:HAT (Half-A-TPR) repeat1e-0963.9
NC_014502:113839:1316541316541330571404Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequence1e-0963.9
NC_010184:4219257:423700142370014237660660Bacillus weihenstephanensis KBAB4, complete genomeTPR repeat-containing protein1e-0963.9
NC_011969:4065460:408667740866774087336660Bacillus cereus Q1 chromosome, complete genometpr domain protein2e-0963.5
NC_011658:4171237:419131741913174191976660Bacillus cereus AH187 chromosome, complete genomeTPR domain-containing protein2e-0963.5
NC_017200:4191963:421131642113164211975660Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein2e-0963.2
NC_005957:4169610:418969741896974190356660Bacillus thuringiensis serovar konkukian str. 97-27, completeTPR domain protein (tetratricopeptide repeat family protein)3e-0962.8
NC_011772:4321117:433856743385674339226660Bacillus cereus G9842, complete genomeTPR domain protein3e-0962.8
NC_013665:1591081:163807216380721638899828Methanocella paludicola SANAE, complete genomehypothetical protein4e-0962.4
NC_008576:2011959:2028673202867320315792907Magnetococcus sp. MC-1, complete genomeTetratricopeptide TPR_2 repeat protein6e-0962
NC_014033:2410331:2416921241692124189662046Prevotella ruminicola 23 chromosome, complete genomehypothetical protein6e-0962
NC_013517:3948500:3962435396243539634541020Sebaldella termitidis ATCC 33386, complete genomeTPR repeat-containing protein6e-0962
NC_013192:1824174:183967318396731840413741Leptotrichia buccalis DSM 1135, complete genomeTPR repeat-containing protein6e-0962
NC_014010:1392536:1444174144417414464802307Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTPR repeat protein7e-0961.6
NC_019907:1454554:1457995145799514602082214Liberibacter crescens BT-1 chromosome, complete genomehypothetical protein1e-0860.8
NC_013156:573037:593217593217594089873Methanocaldococcus fervens AG86, complete genomeTetratricopeptide TPR_2 repeat protein1e-0860.8
NC_005071:523423:5334295334295346431215Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat1e-0860.8
NC_010793:416849:4226024226024237411140Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_032e-0860.5
NC_012968:2228943:2233589223358922351181530Methylotenera mobilis JLW8, complete genomeTetratricopeptide TPR_2 repeat protein2e-0860.1
NC_014033:675626:6927576927576947061950Prevotella ruminicola 23 chromosome, complete genomehypothetical protein2e-0860.1
NC_008255:1500067:1519865151986515214121548Cytophaga hutchinsonii ATCC 33406, complete genomeTPR repeat-containing protein2e-0860.1
NC_014216:1061265:106577510657751066503729Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeTPR repeat-containing protein3e-0859.7
NC_014734:1757995:1760036176003617618111776Paludibacter propionicigenes WB4 chromosome, complete genometetratricopeptide tpr_1 repeat-containing protein3e-0859.7
NC_009925:647752:6545326545326562021671Acaryochloris marina MBIC11017, complete genomepeptidase, M50 family3e-0859.7
NC_010793:1811401:1862337186233718634761140Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_103e-0859.3
NC_010814:2217153:2236817223681722385171701Geobacter lovleyi SZ, complete genomeTetratricopeptide TPR_2 repeat protein3e-0859.3
NC_014836:2723060:2741597274159727435581962Desulfurispirillum indicum S5 chromosome, complete genometetratricopeptide repeat-containing protein4e-0858.9
NC_013887:213699:214472214472215398927Methanocaldococcus sp. FS406-22 chromosome, complete genomeTPR repeat-containing protein4e-0858.9
NC_013223:1349000:136274613627461363693948Desulfohalobium retbaense DSM 5692, complete genomeTPR repeat-containing protein5e-0858.5
NC_013156:154233:165112165112166050939Methanocaldococcus fervens AG86, complete genomeTPR repeat-containing protein6e-0858.5
NC_013161:1878700:1896938189693818979721035Cyanothece sp. PCC 8802, complete genomeTetratricopeptide TPR_2 repeat protein9e-0858.2
NC_011726:1911500:1927111192711119281451035Cyanothece sp. PCC 8801, complete genomeTPR repeat-containing protein9e-0858.2
NC_007519:791679:8079438079438105432601Desulfovibrio alaskensis G20 chromosome, complete genomeTPR repeat-containing protein9e-0857.8
NC_005125:3446470:3446470344647034477711302Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-0757.4
NC_014355:3398033:3425448342544834271331686Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-0757.4
NC_008312:4358134:4363322436332243656702349Trichodesmium erythraeum IMS101, complete genomeTetratricopeptide TPR_21e-0757.4
NC_013665:1591081:1604503160450316056541152Methanocella paludicola SANAE, complete genomehypothetical protein1e-0757.4
NC_009485:7626677:7641362764136276425191158Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein1e-0757.4
NC_008576:677128:6837586837586852751518Magnetococcus sp. MC-1, complete genomeTetratricopeptide TPR_2 repeat protein1e-0757
NC_012108:2305327:2331317233131723335992283Desulfobacterium autotrophicum HRM2, complete genometetratricopeptide (TPR) domain protein2e-0757
NC_008312:2511500:2521887252188725236711785Trichodesmium erythraeum IMS101, complete genomeTPR repeat2e-0757
NC_013665:1591081:1600202160020216013141113Methanocella paludicola SANAE, complete genomehypothetical protein2e-0756.6
NC_014253:1197005:1209723120972312121342412Methanohalobium evestigatum Z-7303 chromosome, complete genomeTetratricopeptide TPR_2 repeat protein3e-0756.2
NC_014365:1094516:1106017110601711071621146Desulfarculus baarsii DSM 2075 chromosome, complete genomeTPR repeat-containing protein3e-0756.2
NC_000909:858840:869478869478870434957Methanocaldococcus jannaschii DSM 2661, complete genometransformation sensitive protein3e-0756.2
NC_007335:672847:689264689264690235972Prochlorococcus marinus str. NATL2A, complete genomeTPR repeat3e-0756.2
NC_015416:223968:241305241305242090786Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein5e-0755.5
NC_002678:3210751:3216483321648332181591677Mesorhizobium loti MAFF303099, complete genomehypothetical protein5e-0755.5
NC_007517:2241104:2274011227401122766622652Geobacter metallireducens GS-15, complete genomeTPR repeat protein6e-0755.1
NC_011725:1486635:1504327150432715055891263Bacillus cereus B4264 chromosome, complete genomeTPR domain-containing protein6e-0755.1
NC_014623:6150028:618338161833816184133753Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesocial gliding motility protein tgl8e-0754.7
NC_014972:1035124:1045768104576810479032136Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTPR repeat-containing protein8e-0754.7
NC_005071:288922:3177203177203200442325Prochlorococcus marinus str. MIT 9313, complete genomeSAM (and some other nucleotide) binding motif:TPR repeat7e-0754.7
NC_010793:1508974:1515258151525815164031146Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_091e-0654.3
NC_010793:1158279:1170884117088411720291146Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_071e-0654.3
NC_015416:2926236:294481129448112945602792Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein1e-0654.3
NC_009488:1917000:1931709193170919328481140Orientia tsutsugamushi str. Boryong, complete genomehypothetical protein1e-0654.3
NC_015425:198315:200992200992201810819Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein1e-0653.9
NC_005877:864118:865128865128865814687Picrophilus torridus DSM 9790, complete genometetratricopeptide repeat family protein2e-0653.5
NC_015416:2967511:296825929682592969107849Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein2e-0653.5
NC_015185:1414453:1440721144072114417461026Desulfurobacterium thermolithotrophum DSM 11699 chromosome,hypothetical protein2e-0653.5
NC_011884:1591430:1599365159936516025863222Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 22e-0653.5
NC_011296:1821244:1830831183083118340013171Thermodesulfovibrio yellowstonii DSM 11347, complete genometetratricopeptide repeat domain protein2e-0653.5
NC_008312:7099417:7112497711249771138551359Trichodesmium erythraeum IMS101, complete genomeTPR repeat2e-0653.5
NC_014122:549932:5945525945525961561605Methanocaldococcus infernus ME chromosome, complete genomeTPR repeat-containing protein3e-0653.1
NC_010673:205500:2121372121372144912355Borrelia hermsii DAH, complete genomesurface-located membrane protein 13e-0653.1
NC_005071:1903581:1909682190968219113311650Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat3e-0653.1
NC_014033:395000:4039554039554072753321Prevotella ruminicola 23 chromosome, complete genomehypothetical protein3e-0652.8
NC_013851:2211120:2226033222603322279311899Allochromatium vinosum DSM 180 chromosome, complete genomeTPR repeat-containing protein3e-0652.8
NC_008593:196257:196257196257197000744Clostridium novyi NT, complete genomeTPR Domain protein3e-0652.8
NC_016609:6750111:6790016679001667919171902Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein4e-0652.4
NC_010814:2217153:2227048222704822321925145Geobacter lovleyi SZ, complete genomeTPR repeat-containing protein5e-0652.4
NC_002939:2697767:2715279271527927169791701Geobacter sulfurreducens PCA, complete genomeTPR domain protein6e-0652
NC_014972:322056:3226073226073248832277Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTPR repeat-containing protein6e-0652
NC_014010:1392536:1448603144860314503571755Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTPR repeat protein6e-0651.6
NC_018607:921923:954028954028954606579Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein7e-0651.6
NC_018604:1943561:194425619442561944834579Brachyspira pilosicoli WesB complete genomeO-linked GlcNAc transferase7e-0651.6
NC_019908:121178:153765153765154343579Brachyspira pilosicoli P43/6/78 chromosome, complete genomeO-linked GlcNAc transferase7e-0651.6