Pre_GI: BLASTP Hits

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Query: NC_008593:1513107:1516508 Clostridium novyi NT, complete genome

Start: 1516508, End: 1516720, Length: 213

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1687050:169251616925161692728213Clostridium botulinum BKT015925 chromosome, complete genomecopper ion binding protein4e-25113
NC_015732:2839030:284315928431592843368210Spirochaeta caldaria DSM 7334 chromosome, complete genomeHeavy metal transport/detoxification protein1e-1478.6
NC_007907:5104476:511809451180945118309216Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1478.2
NC_021182:4022894:402476740247674024976210Clostridium pasteurianum BC1, complete genomecopper chaperone1e-1271.6
NC_006958:3240019:325648832564883256694207Corynebacterium glutamicum ATCC 13032, complete genomeCopper chaperone3e-0857
NC_003450:3266604:328318132831813283387207Corynebacterium glutamicum ATCC 13032, complete genomeputative metal associated protein3e-0857
NC_016627:2524307:253323525332352533447213Clostridium clariflavum DSM 19732 chromosome, complete genomecopper ion binding protein1e-0755.5
NC_013316:1186156:118794411879441188156213Clostridium difficile R20291, complete genomeputative heavy-metal binding protein9e-0855.5
NC_013315:1187986:119032811903281190540213Clostridium difficile CD196 chromosome, complete genomeheavy-metal binding protein9e-0855.5
NC_017179:1197763:120010512001051200317213Clostridium difficile BI1, complete genomeheavy-metal binding protein9e-0855.5
NC_009089:1329826:133216813321681332380213Clostridium difficile 630, complete genomeputative heavy-metal binding protein1e-0755.1
NC_003450:3266604:328868632886863288889204Corynebacterium glutamicum ATCC 13032, complete genomeputative copper chaperone3e-0754.3
NC_009434:3611738:366166736616673661939273Pseudomonas stutzeri A1501, complete genomecopper-binding protein, putative2e-0754.3
NC_013422:991500:995153995153995359207Halothiobacillus neapolitanus c2, complete genomeHeavy metal transport/detoxification protein2e-0754.3
NC_014633:655693:673246673246673515270Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceheavy metal transport/detoxification protein4e-0753.5
NC_004369:2968251:299574929957492995958210Corynebacterium efficiens YS-314, complete genomehypothetical protein9e-0752.4
NC_013939:295220:307900307900308130231Deferribacter desulfuricans SSM1, complete genomeheavy metal binding protein1e-0652
NC_013792:33893:4229942299447612463Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequenceheavy metal translocating P-type ATPase2e-0651.2
NC_017068:1852708:1852708185270818552722565Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative copper-exporting P-type ATPase A2e-0651.2
NC_013849:627811:6481156481156505412427Ferroglobus placidus DSM 10642 chromosome, complete genomeheavy metal translocating P-type ATPase4e-0650.1
NC_014376:2766326:278684527868452787054210Clostridium saccharolyticum WM1 chromosome, complete genomecopper ion binding protein5e-0649.7
NC_009253:2315958:233815323381532338353201Desulfotomaculum reducens MI-1 chromosome, complete genomeheavy metal transport/detoxification protein6e-0649.7