Pre_GI: BLASTP Hits

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Query: NC_008593:1513107:1515808 Clostridium novyi NT, complete genome

Start: 1515808, End: 1516413, Length: 606

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1687050:169187616918761692415540Clostridium botulinum BKT015925 chromosome, complete genomeflavin reductase domain-containing protein1e-90332
NC_020291:1149887:115211611521161152694579Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflavoredoxin-like protein1e-63242
NC_016627:1485799:152121015212101521803594Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein3e-52204
NC_016610:932746:937870937870938436567Tannerella forsythia ATCC 43037 chromosome, complete genomeflavin reductase-like protein1e-39162
NC_016048:1390463:139428113942811394793513Oscillibacter valericigenes Sjm18-20, complete genomeflavoredoxin5e-27120
NC_018870:115982:126690126690127268579Thermacetogenium phaeum DSM 12270 chromosome, complete genomeflavoredoxin Flr2e-25115
NC_006624:1448165:146830914683091468830522Thermococcus kodakarensis KOD1, complete genomeflavin reductase-related oxidoreductase1e-1893.2
NC_010001:1745089:174659217465921747128537Clostridium phytofermentans ISDg, complete genomeputative flavoredoxin8e-1890.1
NC_013216:426877:452128452128452685558Desulfotomaculum acetoxidans DSM 771, complete genomeflavin reductase domain protein FMN-binding1e-1789.7
NC_010520:3674883:367781736778173678353537Clostridium botulinum A3 str. Loch Maree, complete genomeputative flavoredoxin2e-1685.5
NC_013410:2691437:271108727110872711644558Fibrobacter succinogenes subsp. succinogenes S85 chromosome,flavin reductase domain-containing FMN-binding protein8e-1683.6
NC_013132:153163:153163153163153723561Chitinophaga pinensis DSM 2588, complete genomeflavin reductase domain protein FMN-binding3e-1581.6
NC_015856:268034:272965272965273522558Collimonas fungivorans Ter331 chromosome, complete genomeflavin reductase-like, FMN-binding protein1e-1376.3
NC_009706:56000:591485914859711564Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein2e-1375.5
NC_011837:56000:591305913059711582Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-1375.5
NC_012563:1348500:134951913495191350019501Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein4e-1374.7
NC_018665:2563375:256570825657082566301594Exiguobacterium antarcticum B7 chromosome, complete genomeHypothetical protein6e-1373.9
NC_009256:1282793:130437513043751305055681Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein9e-1373.6
NC_010556:2773396:277576427757642776357594Exiguobacterium sibiricum 255-15, complete genomehypothetical protein9e-1373.6
NC_016776:2549465:255286325528632553813951Bacteroides fragilis 638R, complete genomeputative flavoredoxin2e-1272.8
NC_003228:2473956:247806324780632479013951Bacteroides fragilis NCTC 9343, complete genomeputative flavoredoxin2e-1272.8
NC_016047:2658000:268798326879832688552570Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeflavin reductase like domain7e-1270.5
NC_010501:3448389:346549034654903466047558Pseudomonas putida W619, complete genomeflavin reductase domain protein FMN-binding1e-1170.1
NC_004722:5194000:522947652294765230087612Bacillus cereus ATCC 14579, complete genomeNitrilotriacetate monooxygenase component B2e-1169.3
NC_014171:5107956:514133251413325141943612Bacillus thuringiensis BMB171 chromosome, complete genomenitrilotriacetate monooxygenase2e-1169.3
NC_011773:5091609:511082051108205111431612Bacillus cereus AH820 chromosome, complete genomehypothetical protein2e-1168.9
NC_014387:3227875:324141632414163241967552Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeflavin reductase domain-containing protein3e-1168.6
NC_007530:5033095:505113650511365051747612Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein2e-1168.6
NC_003997:5032969:505101050510105051621612Bacillus anthracis str. Ames, complete genomehypothetical protein2e-1168.6
NC_012581:5052000:505366850536685054279612Bacillus anthracis str. CDC 684 chromosome, complete genomehypothetical protein2e-1168.6
NC_012659:5031827:505103650510365051647612Bacillus anthracis str. A0248, complete genomehypothetical protein2e-1168.6
NC_011772:5158680:519141251914125192023612Bacillus cereus G9842, complete genomehypothetical protein4e-1168.2
NC_008600:5046000:507985850798585080469612Bacillus thuringiensis str. Al Hakam, complete genomepossible flavin reductase5e-1167.8
NC_016779:5009320:504450050445005045111612Bacillus cereus F837/76 chromosome, complete genomeNitrilotriacetate monooxygenase component B5e-1167.8
NC_011969:4993386:502894950289495029560612Bacillus cereus Q1 chromosome, complete genomehypothetical protein5e-1167.8
NC_017200:5149528:516887551688755169486612Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein5e-1167.8
NC_003909:4996783:502970950297095030320612Bacillus cereus ATCC 10987, complete genomehypothetical protein5e-1167.8
NC_011725:5201995:523745552374555238066612Bacillus cereus B4264 chromosome, complete genomehypothetical protein4e-1167.8
NC_006322:2658587:267238426723842672953570Bacillus licheniformis ATCC 14580, complete genomehypothetical protein4e-1167.8
NC_006270:2657726:267152326715232672092570Bacillus licheniformis ATCC 14580, complete genomeputative Flavoredoxin4e-1167.8
NC_005957:5037499:505583850558385056449612Bacillus thuringiensis serovar konkukian str. 97-27, completeconserved hypothetical protein, possible flavin reductase6e-1167.4
NC_003047:2798367:279836727983672798993627Sinorhizobium meliloti 1021, complete genomehypothetical protein8e-1167
NC_015519:1888917:190990719099071910464558Tepidanaerobacter sp. Re1 chromosome, complete genomeflavin reductase domain-containing protein8e-1167
NC_014150:3139852:316029131602913160794504Brachyspira murdochii DSM 12563 chromosome, complete genomeflavin reductase domain protein FMN-binding protein7e-1167
NC_003364:756813:765456765456766226771Pyrobaculum aerophilum str. IM2, complete genomehypothetical protein1e-1066.6
NC_015554:2505437:250865825086582509275618Alteromonas sp. SN2 chromosome, complete genomehypothetical protein2e-1065.9
NC_014387:3227875:324356032435603244093534Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein2e-1065.5
NC_017195:2498113:254197725419772542546570Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflavin reductase like domain, putative4e-1064.7
NC_015137:1207769:121955312195531220215663Burkholderia sp. CCGE1001 chromosome 2, complete sequenceflavin reductase domain-containing protein FMN-binding protein9e-1063.5
NC_010694:2492378:249801224980122498638627Erwinia tasmaniensis, complete genomeConserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family2e-0962.4
NC_005363:3562205:356630835663083566910603Bdellovibrio bacteriovorus HD100, complete genomehypothetical protein2e-0962.4
NC_007953:1043957:104840810484081049016609Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein3e-0962
NC_014376:2921769:294715829471582947403246Clostridium saccharolyticum WM1 chromosome, complete genomeflavin reductase domain protein FMN-binding protein2e-0859.3
NC_007508:570000:582574582574583248675Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein2e-0859.3
NC_015572:2186394:220713222071322207674543Methylomonas methanica MC09 chromosome, complete genomeflavin reductase domain-containing protein FMN-binding protein3e-0858.5
NC_003902:555699:569862569862570494633Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein4e-0858.2
NC_007086:557789:571952571952572584633Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-0858.2
NC_007908:1108494:111420211142021114894693Rhodoferax ferrireducens T118, complete genomehypothetical protein4e-0858.2
NC_010730:741842:746303746303746815513Sulfurihydrogenibium sp. YO3AOP1, complete genomeConserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein3e-0755.1
NC_016111:613729:614598614598615209612Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-0754.7
NC_015410:2505168:252739525273952528000606Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein5e-0754.3
NC_010723:1133163:113702911370291137532504Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein1e-0653.1
NC_006322:1959918:197133519713351971943609Bacillus licheniformis ATCC 14580, complete genomeYwrF1e-0653.1
NC_010674:1170264:117314811731481173651504Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein2e-0652.4
NC_001263:2574755:259339525933952594099705Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein3e-0652
NC_007759:2179000:219860521986052199057453Syntrophus aciditrophicus SB, complete genomedim6/ntab flavoprotein family5e-0651.2
NC_013928:370893:388377388377388958582Streptococcus mutans NN2025, complete genomecytosolic protein1e-0550.1