Pre_GI: BLASTP Hits

Some Help

Query: NC_008593:1513107:1514953 Clostridium novyi NT, complete genome

Start: 1514953, End: 1515771, Length: 819

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1687050:169101816910181691836819Clostridium botulinum BKT015925 chromosome, complete genomeAP endonuclease2e-140498
NC_009635:1067334:106921410692141070044831Methanococcus aeolicus Nankai-3 chromosome, complete genomexylose isomerase domain-containing protein4e-57221
NC_005213:63752:712247122472033810Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein2e-48192
NC_009464:225400:240734240734241531798Uncultured methanogenic archaeon RC-I, complete genomeputative endonuclease IV2e-35149
NC_009437:2367842:236938723693872370247861Caldicellulosiruptor saccharolyticus DSM 8903, complete genomexylose isomerase domain-containing protein3e-33142
NC_014652:1032711:107264410726441073504861Caldicellulosiruptor hydrothermalis 108 chromosome, completexylose isomerase domain protein tim barrel3e-33142
NC_014720:1161841:118017711801771181037861Caldicellulosiruptor kronotskyensis 2002 chromosome, completexylose isomerase domain-containing protein tim barrel6e-33141
NC_014392:969498:100784310078431008703861Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeXylose isomerase domain-containing protein TIM barrel6e-33141
NC_014471:1841171:186040818604081861268861Ignisphaera aggregans DSM 17230 chromosome, complete genomeEndonuclease IV5e-33141
NC_012034:1783912:178547617854761786336861Anaerocellum thermophilum DSM 6725, complete genomeXylose isomerase domain protein TIM barrel4e-33141
NC_014721:1777644:177920817792081780068861Caldicellulosiruptor kristjanssonii 177R1B chromosome, completexylose isomerase domain-containing protein tim barrel1e-32140
NC_015949:1180755:118231911823191183179861Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomexylose isomerase domain-containing protein1e-32140
NC_014657:1518721:151916815191681520028861Caldicellulosiruptor owensensis OL chromosome, complete genomexylose isomerase domain-containing protein tim barrel1e-32140
NC_002754:1968668:198302819830281983879852Sulfolobus solfataricus P2, complete genomeEndonuclease IV related protein2e-30133
NC_017276:2481083:249550624955062496336831Sulfolobus islandicus REY15A chromosome, complete genomexylose isomerase domain protein TIM barrel2e-30132
NC_012589:2698556:271048027104802711310831Sulfolobus islandicus L.S.2.15, complete genomeXylose isomerase domain protein TIM barrel4e-30132
NC_012588:2567102:258303825830382583868831Sulfolobus islandicus M.14.25 chromosome, complete genomexylose isomerase7e-30130
NC_012623:2774910:278637327863732787203831Sulfolobus islandicus Y.N.15.51 chromosome, complete genomexylose isomerase7e-30130
NC_012632:2654200:266660726666072667437831Sulfolobus islandicus M.16.27 chromosome, complete genomexylose isomerase domain-containing protein7e-30130
NC_012726:2549813:256085225608522561682831Sulfolobus islandicus M.16.4 chromosome, complete genomexylose isomerase domain-containing protein7e-30130
NC_013769:2685000:269624026962402697070831Sulfolobus islandicus L.D.8.5 chromosome, complete genomexylose isomerase domain-containing protein7e-30130
NC_017275:2615814:262925926292592630089831Sulfolobus islandicus HVE10/4 chromosome, complete genomexylose isomerase domain-containing protein2e-29129
NC_012622:2662428:267626626762662677096831Sulfolobus islandicus Y.G.57.14 chromosome, complete genomexylose isomerase domain-containing protein2e-29129
NC_007925:2892371:290013129001312901078948Rhodopseudomonas palustris BisB18, complete genomeXylose isomerase-like TIM barrel7e-1891.3
NC_009662:276287:276756276756277601846Nitratiruptor sp. SB155-2, complete genomeendonuclease IV7e-0858.2
NC_019892:6645515:666449666644966665377882Singulisphaera acidiphila DSM 18658 chromosome, complete genomeapurinic endonuclease APN19e-0754.3
NC_013720:2898639:290109729010972902062966Pirellula staleyi DSM 6068, complete genomeapurinic endonuclease Apn12e-0652.8