Pre_GI: BLASTP Hits

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Query: NC_008593:1461771:1467690 Clostridium novyi NT, complete genome

Start: 1467690, End: 1469357, Length: 1668

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:2422226:2445686244568624473531668Clostridium pasteurianum BC1, complete genomehypothetical protein0880
NC_017295:1809386:1830784183078418324511668Clostridium acetobutylicum EA 2018 chromosome, complete genomemetal-dependent hydrolase of metallo-beta-lactamase superfamily0860
NC_015687:1811573:1832971183297118346381668Clostridium acetobutylicum DSM 1731 chromosome, complete genomemetal-dependent hydrolase0860
NC_003030:1811820:1831371183137118330381668Clostridium acetobutylicum ATCC 824, complete genomePredicted metal-dependent hydrolase of metallo-beta-lactamase superfamily0860
NC_014328:1307490:1318293131829313199601668Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative metal-dependent hydrolase0858
NC_009495:2685646:2696312269631226980151704Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeRNA-metabolizing metallo-beta-lactamase0834
NC_009699:2733529:2744276274427627459851710Clostridium botulinum F str. Langeland chromosome, complete genomeRNA-metabolizing metallo-beta-lactamase family protein0833
NC_015573:2463123:2507140250714025088041665Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeRibocuclease J0708
NC_019903:2578966:2595530259553025971941665Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,hypothetical protein0665
NC_019978:686362:7005717005717022351665Halobacteroides halobius DSM 5150, complete genomehypothetical protein1e-178626
NC_013520:1936209:1937359193735919395212163Veillonella parvula DSM 2008, complete genomebeta-lactamase domain protein8e-166583
NC_011146:4505821:4508385450838545100611677Geobacter bemidjiensis Bem, complete genomebeta-lactamase domain protein1e-165583
NC_013192:305478:3363703363703380431674Leptotrichia buccalis DSM 1135, complete genomebeta-lactamase domain protein3e-152538
NC_004461:779000:7791327791327808141683Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein3e-150532
NC_013406:3400114:3402012340201234036851674Paenibacillus sp. Y412MC10 chromosome, complete genomebeta-lactamase domain-containing protein7e-148524
NC_012925:140000:1488451488451505241680Streptococcus suis P1/7, complete genomemetallo-beta-lactamase superfamily protein8e-145514
NC_009442:142500:1486531486531503321680Streptococcus suis 05ZYH33 chromosome, complete genomemetallo-beta-lactamase superfamily hydrolase8e-145514
NC_009443:142500:1485571485571502361680Streptococcus suis 98HAH33, complete genomemetallo-beta-lactamase superfamily hydrolase8e-145514
NC_012924:142500:1486501486501503291680Streptococcus suis SC84, complete genomemetallo-beta-lactamase superfamily protein8e-145514
NC_012926:140000:1486851486851503641680Streptococcus suis BM407 chromosome, complete genomemetallo-beta-lactamase superfamily protein8e-145514
NC_006448:1568000:1582808158280815844901683Streptococcus thermophilus LMG 18311, complete genomemetallo-beta-lactamase superfamily protein7e-145514
NC_006449:1572000:1586368158636815880501683Streptococcus thermophilus CNRZ1066, complete genomemetallo-beta-lactamase superfamily protein1e-144513
NC_015875:190041:2074002074002090791680Streptococcus pseudopneumoniae IS7493 chromosome, complete genomehypothetical protein1e-140500
NC_014960:2141345:2141345214134521429911647Anaerolinea thermophila UNI-1, complete genomehypothetical protein4e-134478
NC_009707:1811650:1825826182582618278141989Campylobacter jejuni subsp. doylei 269.97 chromosome, completemetallo-beta-lactamase family protein8e-134477
NC_017280:1584961:1598351159835116003391989Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomeRibonuclease J3e-133475
NC_014802:1631483:1645686164568616476741989Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completemetallo-beta-lactamase family protein7e-133474
NC_002163:1607360:1621696162169616236901995Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein8e-133474
NC_017279:1603916:1619090161909016210781989Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeputative metallo-beta-lactamase family protein8e-133474
NC_008787:1582110:1596303159630315982911989Campylobacter jejuni subsp. jejuni 81-176, complete genomemetallo-beta-lactamase family protein9e-133474
NC_003912:1742370:1757543175754317595311989Campylobacter jejuni RM1221, complete genomemetallo-beta-lactamase family protein3e-132472
NC_017281:1645903:1661076166107616630641989Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeZn-dependent hydrolase, RNA-metabolising3e-132472
NC_014836:1052214:1052214105221410539591746Desulfurispirillum indicum S5 chromosome, complete genomeRNA-metabolising metallo-beta-lactamase4e-129462
NC_011999:936500:9526209526209542931674Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein5e-129461
NC_002952:1291444:1310610131061013122831674Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein8e-125447
NC_017371:1470582:1468520146852014705982079Helicobacter pylori Gambia94/24 chromosome, complete genomehypothetical protein1e-124447
NC_009782:1327340:1346504134650413481771674Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein3e-124446
NC_017338:1234077:1250934125093412526071674Staphylococcus aureus subsp. aureus JKD6159 chromosome, completemetallo-beta-lactamase family protein3e-124446
NC_017341:1291583:1310750131075013124231674Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,metallo-beta-lactamase family protein3e-124446
NC_004461:921364:9570409570409587581719Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein8e-120431
NC_018750:5828000:5838201583820158398861686Streptomyces venezuelae ATCC 10712, complete genomeZn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog3e-118426
NC_015953:5444572:5452535545253554542201686Streptomyces sp. SirexAA-E chromosome, complete genomeRNA-metabolising metallo-beta-lactamase5e-117421
NC_017353:1699652:1699652169965217012711620Staphylococcus lugdunensis N920143, complete genomehypothetical protein3e-116419
NC_016111:5181475:5191935519193551936201686Streptomyces cattleya NRRL 8057, complete genomeBeta-lactamase domain-containing protein8e-116417
NC_014246:1579811:1600395160039516020891695Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative metal-dependent hydrolase1e-113410
NC_011047:255208:2800472800472817411695Candidatus Phytoplasma mali, complete genomePredicted hydrolase of the metallo-beta-lactamase superfamily4e-112405
NC_008011:663958:6898686898686915231656Lawsonia intracellularis PHE/MN1-00, complete genomepredicted hydrolase of the metallo-beta-lactamase superfamily1e-111404
NC_019908:982471:9824719824719843241854Brachyspira pilosicoli P43/6/78 chromosome, complete genomemetallo-beta-lactamase family protein2e-111403
NC_018604:1045774:1064906106490610667591854Brachyspira pilosicoli WesB complete genomemetallo-beta-lactamase family protein2e-111403
NC_014330:2268773:2287887228788722897401854Brachyspira pilosicoli 95/1000 chromosome, complete genomemetallo-beta-lactamase family protein2e-111403
NC_012004:1053682:1080742108074210824061665Streptococcus uberis 0140J, complete genomemetallo-beta-lactamase superfamily protein2e-110400
NC_002677:1822500:1822931182293118246071677Mycobacterium leprae TN, complete genomehypothetical protein3e-106385
NC_016789:1495274:1516924151692415189782055Corynebacterium diphtheriae PW8 chromosome, complete genomehypothetical protein2e-100367
NC_016800:1477937:1498059149805915001132055Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein2e-100367
NC_002935:1461458:1481579148157914836332055Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein2e-100367
NC_014760:925933:9495609495609514041845Mycoplasma bovis PG45 chromosome, complete genomefamily protein5e-93342
NC_006831:250074:2533722533722550001629Ehrlichia ruminantium str. Gardel, complete genomehypothetical protein2e-86320
NC_006832:252952:2562282562282578561629Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein2e-86320
NC_005295:272708:2759842759842776121629Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein2e-86320
NC_000908:160072:1654711654711671801710Mycoplasma genitalium G37, complete genomemetallo-beta-lactamase superfamily protein2e-85317
NC_007354:233991:2372932372932389271635Ehrlichia canis str. Jake, complete genomeBeta-lactamase-like7e-85315
NC_015709:1459838:1464464146446414661041641Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completebeta-lactamase domain-containing protein1e-81304
NC_014774:1019273:1020763102076310224451683Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completebeta-lactamase domain-containing protein1e-76288
NC_008358:1789816:1802801180280118044981698Hyphomonas neptunium ATCC 15444, complete genomemetallo-beta-lactamase family protein1e-75284
NC_014532:2298628:2321592232159223232621671Halomonas elongata DSM 2581, complete genomeK070213e-70266
NC_012811:62867:6286762867644531587Methylobacterium extorquens AM1 megaplasmid, complete sequenceBeta-lactamase family protein1e-59231
NC_009464:2881771:2889101288910128904381338Uncultured methanogenic archaeon RC-I, complete genomemetallo-beta-lactamase1e-57224
NC_011047:255208:2783062783062799851680Candidatus Phytoplasma mali, complete genomeMetallo-beta-lactamase family protein4e-57223
NC_007681:979815:9905039905039918461344Methanosphaera stadtmanae DSM 3091, complete genomepredicted hydrolase2e-54213
NC_014507:758820:7748387748387761841347Methanoplanus petrolearius DSM 11571 chromosome, complete genomeRNA-metabolising metallo-beta-lactamase8e-54211
NC_018876:863314:8760148760148773601347Methanolobus psychrophilus R15 chromosome, complete genomebeta-lactamase-like protein2e-53210
NC_019977:1621939:1625736162573616270791344Methanomethylovorans hollandica DSM 15978, complete genomeputative hydrolase of the metallo-beta-lactamase superfamily5e-52206
NC_009515:1409912:1464910146491014662741365Methanobrevibacter smithii ATCC 35061, complete genomeRNA hydrolase4e-51202
NC_000909:762859:7838257838257851711347Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein2e-50200
NC_013887:1287783:1287783128778312891291347Methanocaldococcus sp. FS406-22 chromosome, complete genomeRNA-metabolising metallo-beta-lactamase5e-50199
NC_003551:723901:7365237365237378841362Methanopyrus kandleri AV19, complete genomePredicted hydrolase of the metallo-beta-lactamase superfamily8e-50198
NC_014122:665684:6667126667126680581347Methanocaldococcus infernus ME chromosome, complete genomeRNA-metabolising metallo-beta-lactamase3e-49196
NC_015574:1541613:1552376155237615537281353Methanobacterium sp. SWAN-1 chromosome, complete genomeRNA-metabolising metallo-beta-lactamase1e-47191
NC_019962:3331849:3337327333732733386731347Natrinema pellirubrum DSM 15624, complete genomeputative hydrolase of the metallo-beta-lactamase superfamily1e-46187
NC_013158:2046185:2068719206871920700621344Halorhabdus utahensis DSM 12940, complete genomebeta-lactamase domain protein2e-46187
NC_008751:1043269:1059661105966110609051245Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomebeta-lactamase domain protein4e-1170.1
NC_015578:3495034:3510473351047335117771305Treponema primitia ZAS-2 chromosome, complete genomebeta-lactamase domain-containing protein1e-1068.6
NC_002754:319315:3293193293193307971479Sulfolobus solfataricus P2, complete genomemRNA 3'-end processing factor, putative3e-0757.4
NC_003901:815389:8331378331378350501914Methanosarcina mazei Go1, complete genomecleavage and polyadenylation specificity factor 100 kD subunit3e-0757.4
NC_012589:1684948:1699765169976517013241560Sulfolobus islandicus L.S.2.15, complete genomebeta-lactamase domain protein2e-0654.7
NC_017275:1635959:1646104164610416476631560Sulfolobus islandicus HVE10/4 chromosome, complete genomebeta-lactamase2e-0654.7
NC_017276:1491473:1501619150161915031781560Sulfolobus islandicus REY15A chromosome, complete genomebeta-lactamase2e-0654.7
NC_012726:1611936:1622020162202016235791560Sulfolobus islandicus M.16.4 chromosome, complete genomebeta-lactamase domain-containing protein2e-0654.7
NC_012588:1585808:1595893159589315974521560Sulfolobus islandicus M.14.25 chromosome, complete genomebeta-lactamase2e-0654.7
NC_012622:1646000:1653898165389816554571560Sulfolobus islandicus Y.G.57.14 chromosome, complete genomebeta-lactamase domain-containing protein2e-0654.7
NC_012623:960327:9711639711639727221560Sulfolobus islandicus Y.N.15.51 chromosome, complete genomebeta-lactamase domain-containing protein2e-0654.7
NC_013769:1705500:1715057171505717166161560Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein2e-0654.7
NC_012668:368305:3698053698053711721368Vibrio cholerae MJ-1236 chromosome 1, complete sequencemetallo-beta-lactamase family protein RNA-specific2e-0654.3
NC_012578:224559:2537952537952551621368Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein2e-0654.3
NC_002505:238569:2690682690682704351368Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-0654.3
NC_012632:1710223:1721789172178917233481560Sulfolobus islandicus M.16.27 chromosome, complete genomebeta-lactamase domain-containing protein3e-0653.9