Pre_GI: BLASTP Hits

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Query: NC_008593:1362218:1362218 Clostridium novyi NT, complete genome

Start: 1362218, End: 1364575, Length: 2358

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009441:3597020:3623365362336536257372373Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein0726
NC_012470:1946968:1956979195697919592552277Streptococcus equi subsp. zooepidemicus, complete genomehypothetical protein5e-67256
NC_014323:3976351:3986292398629239886222331Herbaspirillum seropedicae SmR1 chromosome, complete genomesubtilisin-like serine protease2e-48194
NC_012988:2507142:2513804251380425163322529Methylobacterium extorquens DM4, complete genomehypothetical protein3e-44181
NC_009659:1923925:1970963197096319732932331Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein4e-36154
NC_013943:2361617:2361617236161723637432127Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein6e-29129
NC_015573:1729057:1741078174107817433962319Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin1e-26122
NC_015259:673662:7094367094367119702535Polymorphum gilvum SL003B-26A1 chromosome, complete genomehypothetical protein2e-26121
NC_013740:660880:6833306833306855852256Acidaminococcus fermentans DSM 20731, complete genomeAAA - ATPase, putative6e-26120
NC_010337:2793667:2811388281138828139192532Heliobacterium modesticaldum Ice1, complete genomesubtilisin-like protease7e-23109
NC_015385:965341:9842449842449864602217Treponema succinifaciens DSM 2489 chromosome, complete genomeAAA - ATPase, putative4e-22107
NC_015422:1876102:1889192188919218913902199Alicycliphilus denitrificans K601 chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin1e-20102
NC_013851:3142182:3152457315245731547452289Allochromatium vinosum DSM 180 chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin3e-1894.4
NC_015847:808931:8089318089318113722442Methanococcus maripaludis XI chromosome, complete genomepeptidase S8/S53 subtilisin kexin sedolisin5e-1893.6
NC_014752:834616:8688658688658711082244Neisseria lactamica ST-640, complete genomesubtilisin-like protease1e-1792.4
NC_007644:280000:3005713005713018481278Moorella thermoacetica ATCC 39073, complete genomehypothetical protein3e-1791.3
NC_008781:2575213:2583057258305725852762220Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein3e-1790.9
NC_002927:960369:9736529736529760062355Bordetella bronchiseptica RB50, complete genomeputative serine protease4e-1687
NC_015873:924392:9599629599629622172256Megasphaera elsdenii DSM 20460, complete genomeAAA-ATPase6e-1686.7
NC_007492:6372900:6383540638354063857532214Pseudomonas fluorescens PfO-1, complete genomehypothetical protein4e-1584.3
NC_014448:225414:2401712401712424562286Mycoplasma hyorhinis HUB-1 chromosome, complete genome2e-1481.6
NC_008390:2156188:2165690216569021679062217Burkholderia cepacia AMMD chromosome 1, complete sequencehypothetical protein4e-1377.4
NC_005773:208000:2140902140902163002211Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein4e-1377.4
NC_007963:1190847:1222487122248712247182232Chromohalobacter salexigens DSM 3043, complete genomepeptidase S8 and S53, subtilisin, kexin, sedolisin8e-1272.8
NC_008278:874015:8839908839908850211032Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative Subtilisin-like domain3e-1067.8
NC_016147:2337244:2364206236420623660111806Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein4e-0757.4