Pre_GI: BLASTP Hits

Some Help

Query: NC_008593:1103293:1121394 Clostridium novyi NT, complete genome

Start: 1121394, End: 1121750, Length: 357

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014328:1135854:114257011425701142974405Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar biogenesis protein FliO3e-1580.5
NC_021182:2883716:289941928994192899820402Clostridium pasteurianum BC1, complete genomeflagellar biogenesis protein4e-1580.1
NC_009617:4911595:491669949166994917097399Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar formation protein7e-1062.8
NC_009697:2714668:271542827154282715835408Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar biosynthesis domain-containing protein2e-0961.2
NC_009698:2649453:265235726523572652764408Clostridium botulinum A str. Hall chromosome, complete genomeflagellar biosynthesis domain-containing protein2e-0961.2
NC_010520:2860960:286386428638642864271408Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthesis domain protein2e-0961.2
NC_020291:4903981:492761249276124928010399Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biogenesis protein4e-0960.1
NC_010723:833870:849405849405849791387Clostridium botulinum E3 str. Alaska E43, complete genomeputative flagellar biosynthesis protein8e-0959.3
NC_010674:858397:871164871164871484321Clostridium botulinum B str. Eklund 17B, complete genomeputative flagellar protein1e-0651.6
NC_009253:2615777:261865326186532619075423Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein3e-0650.4