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Query: NC_008563:3843859 Escherichia coli APEC O1, complete genome

Start: 3843859, End: 3868448, Length: 24590

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007946:38110823811082383566424583Escherichia coli UTI89, complete genome027660BLASTN svgBLASTP svg
NC_004431:39864723986472400948723016Escherichia coli CFT073, complete genome027490BLASTN svgBLASTP svg
NC_008253:36663873666387368940123015Escherichia coli 536, complete genome027370BLASTN svgBLASTP svg
NC_011751:39842363984236400841624181Escherichia coli UMN026 chromosome, complete genome017280BLASTN svgBLASTP svg
NC_011740:34534553453455348056527111Escherichia fergusonii ATCC 35469, complete genome08142BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome04345BLASTN svgBLASTP svg
NC_015968:43898714389871441516025290Enterobacter asburiae LF7a chromosome, complete genome02115BLASTN svgBLASTP svg
NC_012214:37506493750649377787527227Erwinia pyrifoliae Ep1/96, complete genome1e-82315BLASTN svgBLASTP svg
NC_012779:3570720*3570720359409923380Edwardsiella ictaluri 93-146, complete genome1e-33153BLASTN svgBLASTP svg
NC_012912:24270924270927148728779Dickeya zeae Ech1591, complete genome2e-22115BLASTN svgBLASTP svg
NC_007626:2283793*2283793230659922807Magnetospirillum magneticum AMB-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007492:2203220*2203220222417320954Pseudomonas fluorescens PfO-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013854:33054333054335359923057Azospirillum sp. B510, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011420:2803196*2803196282514221947Rhodospirillum centenum SW, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010688:14916114916117820129041Xanthomonas campestris pv. campestris, complete genome7e-0763.9BLASTN svgBLASTP svg