Pre_GI: BLASTN Hits

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Query: NC_008563:1651270 Escherichia coli APEC O1, complete genome

Start: 1651270, End: 1674125, Length: 22856

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010498:16159801615980163716721188Escherichia coli SMS-3-5, complete genome024130BLASTN svgBLASTP svg
NC_010067:14140001414000143680422805Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete0706BLASTN svgBLASTP svg
NC_002655:19091391909139193312123983Escherichia coli O157:H7 EDL933, complete genome02502BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome06137BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome09825BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome09825BLASTN svgBLASTP svg
NC_009800:16325851632585165133118747Escherichia coli HS, complete genome023780BLASTN svgBLASTP svg
CP002185:17274931727493175122423732Escherichia coli W, complete genome023920BLASTN svgBLASTP svg
CP002516:23616282361628238443522808Escherichia coli KO11, complete genome023920BLASTN svgBLASTP svg
CU928160:16255351625535164926623732Escherichia coli IAI1 chromosome, complete genome023930BLASTN svgBLASTP svg
NC_009792:14797791479779150315123373Citrobacter koseri ATCC BAA-895, complete genome1e-94355BLASTN svgBLASTP svg
NC_013850:28460692846069288409738029Klebsiella variicola At-22 chromosome, complete genome2e-68268BLASTN svgBLASTP svg
NC_009778:17174581717458175914341686Enterobacter sakazakii ATCC BAA-894, complete genome1e-51212BLASTN svgBLASTP svg
NC_014121:35538093553809358001526207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-1797.6BLASTN svgBLASTP svg
NC_012880:10914861091486111695125466Dickeya dadantii Ech703, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014500:24028812402881243009627216Dickeya dadantii 3937 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010465:30469043046904306991523012Yersinia pseudotuberculosis YPIII, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008149:30229703022970304559922630Yersinia pestis Nepal516, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_005810:14133051413305143757924275Yersinia pestis biovar Microtus str. 91001, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004088:31869543186954320951322560Yersinia pestis KIM, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013508:275081*27508130064325563Edwardsiella tarda EIB202, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012779:261438*26143828632424887Edwardsiella ictaluri 93-146, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012214:20190002019000204685227853Erwinia pyrifoliae Ep1/96, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013956:595320*59532063373038411Pantoea ananatis LMG 20103 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020291:15931431593143161363220490Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014479:3939183*3939183396968630504Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010465:933488*93348895909925612Yersinia pseudotuberculosis YPIII, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome3e-0661.9BLASTN svgBLASTP svg