Pre_GI: BLASTP Hits

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Query: NC_008563:5011997:5020085 Escherichia coli APEC O1, complete genome

Start: 5020085, End: 5020636, Length: 552

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4962008:497007449700744970646573Escherichia coli S88 chromosome, complete genomehypothetical protein2e-102370
NC_004431:3040953:305060930506093051181573Escherichia coli CFT073, complete genomeUnknown protein encoded by prophage2e-102370
NC_011740:4520373:452754345275434528115573Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-101368
NC_009800:1657550:166943916694391669990552Escherichia coli HS, complete genomehypothetical protein2e-99360
NC_012967:1593101:161257316125731613124552Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein5e-97353
NC_013941:5317424:532508953250895325433345Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-55214
NC_012967:1403733:141684214168421417186345Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein8e-55213
NC_012947:2366000:237869923786992379043345Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein8e-55213
NC_011748:1408280:142895114289511429265315Escherichia coli 55989, complete genome2e-36151
CU928145:1408280:142895114289511429265315Escherichia coli 55989 chromosome, complete genomefragment of conserved hypothetical protein (partial)2e-36151
CU928145:1773642:178346617834661783780315Escherichia coli 55989 chromosome, complete genomefragment of conserved hypothetical protein (partial)1e-35149
NC_011748:1773642:178346617834661783780315Escherichia coli 55989, complete genome1e-35149
NC_013008:3525428:354252335425233542867345Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-33142
NC_011353:3573641:358764635876463587990345Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-33142
NC_002695:3468873:348353834835383483882345Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-33142
NC_002695:1929215:194421919442191944563345Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-32139
NC_013361:1754346:175878317587831759127345Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-32139
CU928160:1668842:167807716780771678388312Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; Qin prophage8e-29126
NC_011741:1668842:167807716780771678388312Escherichia coli IAI1 chromosome, complete genomehypothetical protein8e-29126
NC_013361:2138716:214912821491282149439312Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein8e-29126
CP002516:2305659:232549623254962325807312Escherichia coli KO11, complete genomeprotein of unknown function DUF13278e-29126
AC_000091:1627049:164176816417681642079312Escherichia coli W3110 DNA, complete genomehypothetical protein8e-29126
NC_010468:2265423:228243922824392282750312Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF13278e-29126
CP002185:1770815:178004917800491780360312Escherichia coli W, complete genomeQin prophage; predicted protein8e-29126
NC_000913:1625500:163807816380781638389312Escherichia coli K12, complete genomeQin prophage; predicted protein8e-29126
NC_010473:1712984:172770317277031728014312Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted protein8e-29126
NC_011750:1565000:157277115727711573082312Escherichia coli IAI39 chromosome, complete genomehypothetical protein8e-29126
NC_012759:1517500:153013715301371530448312Escherichia coli BW2952 chromosome, complete genomeQin prophage protein8e-29126
NC_016902:2305659:232549623254962325807312Escherichia coli KO11FL chromosome, complete genomehypothetical protein8e-29126
NC_011751:1859606:186997018699701870257288Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-23109
NC_011353:2957962:296018729601872960744558Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-1272