Pre_GI: BLASTP Hits

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Query: NC_008563:5011997:5016207 Escherichia coli APEC O1, complete genome

Start: 5016207, End: 5017202, Length: 996

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4962008:496621749662174967212996Escherichia coli S88 chromosome, complete genomehypothetical protein0681
NC_004431:3040953:305404330540433055038996Escherichia coli CFT073, complete genomeHypothetical protein ydfU0681
NC_011740:4520373:452368445236844524679996Escherichia fergusonii ATCC 35469, complete genomehypothetical protein0679
NC_011750:5045927:506651650665165067511996Escherichia coli IAI39 chromosome, complete genomehypothetical protein0678
NC_010658:1933605:195834719583471959336990Shigella boydii CDC 3083-94, complete genomehypothetical protein0666
NC_013941:5317424:532128253212825322199918Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-178625
NC_016856:2379027:239112023911202392109990Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein6e-171600
NC_016863:2324293:233931223393122340301990Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein3e-170597
NC_016860:2323017:233511023351102336105996Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein6e-169593
NC_016857:2325190:233728323372832338278996Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein6e-169593
NC_011083:2375061:238714723871472388142996Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein6e-169593
NC_016810:2325190:233728323372832338272990Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein2e-168592
NC_003197:2327474:233956723395672340556990Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-168592
NC_017046:2324554:233664723366472337600954Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein7e-162570
NC_009778:959982:9831089831089841211014Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-128457
NC_009436:2776410:281481328148132815802990Enterobacter sp. 638, complete genomehypothetical protein7e-125447
NC_010102:683444:705562705562706242681Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-114411
NC_013282:1804909:182145718214571822383927Cronobacter turicensis, complete genomeUncharacterized protein ydfU6e-114410
NC_010468:2265423:2278500227850022795491050Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF12773e-112405
CU928160:1668842:1681278168127816823271050Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; Qin prophage3e-112405
NC_011741:1668842:1681278168127816823271050Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-112405
NC_013361:2138716:2152329215232921533781050Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-112405
AC_000091:1627049:1644969164496916460181050Escherichia coli W3110 DNA, complete genomehypothetical protein2e-112405
NC_000913:1625500:1641279164127916423281050Escherichia coli K12, complete genomeQin prophage; predicted protein2e-112405
NC_009801:1756610:1764048176404817650971050Escherichia coli E24377A, complete genomehypothetical protein5e-112404
CP002516:2305659:2321557232155723226061050Escherichia coli KO11, complete genomeHNH nuclease8e-112403
CP002185:1770815:1783250178325017842991050Escherichia coli W, complete genomeQin prophage; hypothetical protein8e-112403
NC_016902:2305659:2321557232155723226061050Escherichia coli KO11FL chromosome, complete genomeHNH nuclease8e-112403
NC_011751:1859606:1873171187317118742201050Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-110399
NC_020181:5217000:5242770524277052438251056Enterobacter aerogenes EA1509E, complete genomePutative cytoplasmic protein2e-109395
NC_013364:1596278:1612647161264716136961050Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-109394
CU928145:1773642:1787825178782517888741050Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; Qin prophage6e-109394
NC_011748:1773642:1787825178782517888741050Escherichia coli 55989, complete genomeconserved hypothetical protein; Qin prophage6e-109394
CU928145:1408280:1421253142125314223021050Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; Qin prophage1e-108392
NC_011748:1408280:1421253142125314223021050Escherichia coli 55989, complete genomeconserved hypothetical protein; Qin prophage1e-108392
NC_009801:1419324:1431853143185314329021050Escherichia coli E24377A, complete genomehypothetical protein3e-108391
NC_012759:1517500:153333815333381534285948Escherichia coli BW2952 chromosome, complete genomeQin prophage protein6e-103374
NC_012731:2083650:2106428210642821074921065Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-100366
NC_014838:218000:2358762358762368921017Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein1e-95349
NC_020181:2097066:2104638210463821056691032Enterobacter aerogenes EA1509E, complete genomePutative cytoplasmic protein4e-95348
NC_011283:3379181:3411582341158234126131032Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-94346
NC_016612:3803130:3821552382155238225831032Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-93342
NC_016816:2953530:2965175296517529661881014Pantoea ananatis LMG 5342, complete genomephage protein1e-91336
NC_011601:1269500:1283502128350212845601059Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein4e-88324
NC_013961:3413011:342954734295473430296750Erwinia amylovora, complete genomeUncharacterized protein ydfU1e-69263
NC_017047:1906000:1911997191199719130101014Rahnella aquatilis HX2 chromosome, complete genomeHNH nuclease6e-69261
NC_017060:59500:977489774898692945Rahnella aquatilis HX2 plasmid PRA1, complete sequenceHNH nuclease1e-67257
NC_012947:2189533:219213021921302192780651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-67257
NC_013971:335247:341305341305341835531Erwinia amylovora ATCC 49946 chromosome, complete genomephage protein5e-57221
NC_009053:553298:5714125714125724341023Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein1e-56220
NC_020418:2910593:2910593291059329116091017Morganella morganii subsp. morganii KT, complete genomePutative cytoplasmic protein9e-47187
NC_009783:1956000:196134019613401962311972Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein6e-43174
NC_005140:960261:9607199607199617651047Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein6e-28125
NC_015717:1723047:1752439175243917535901152Hyphomicrobium sp. MC1, complete genomehypothetical protein5e-0858.9