Pre_GI: BLASTP Hits

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Query: NC_008563:4905186:4916492 Escherichia coli APEC O1, complete genome

Start: 4916492, End: 4917397, Length: 906

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:4875997:490026349002634901168906Escherichia coli UTI89, complete genomehypothetical protein3e-172604
NC_011601:4856717:487357148735714874476906Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerestriction endonuclease5e-168590
NC_011750:4978000:498298549829854983914930Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-167587
NC_008253:4817864:484076148407614841633873Escherichia coli 536, complete genomehypothetical protein9e-166582
NC_009801:4882684:489775948977594898631873Escherichia coli E24377A, complete genomehypothetical protein6e-162570
NC_009800:4529504:454053345405334541405873Escherichia coli HS, complete genomehypothetical protein2e-161568
NC_013364:5255700:526567852656785266550873Escherichia coli O111:H- str. 11128, complete genomeputative restriction endonuclease7e-161566
NC_010498:4899167:490680749068074907679873Escherichia coli SMS-3-5, complete genomehypothetical protein1e-160565
NC_013941:5192500:519707251970725197956885Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-160563
NC_007613:4403070:440931644093164410188873Shigella boydii Sb227, complete genomehypothetical protein7e-160563
NC_002655:5382557:538881053888105389694885Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-159561
CP002516:4199133:421402542140254214897873Escherichia coli KO11, complete genomeputative restriction endonuclease4e-159560
CP002185:4791811:479797347979734798845873Escherichia coli W, complete genomeputative restriction endonuclease4e-159560
NC_016902:4199133:421402542140254214897873Escherichia coli KO11FL chromosome, complete genomeputative restriction endonuclease4e-159560
NC_002695:5352554:535880753588075359658852Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-153540
NC_013008:5382917:538851653885165389367852Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-152537
NC_011353:5426793:543245554324555433306852Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeHNH nuclease3e-152537
NC_009436:522649:545015545015545908894Enterobacter sp. 638, complete genomehypothetical protein4e-132471
NC_014121:677799:695610695610696479870Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-129461
NC_016514:506611:527739527739528614876Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein6e-129460
NC_013850:4829455:483627748362774837146870Klebsiella variicola At-22 chromosome, complete genomehypothetical protein4e-127454
NC_011283:4966471:497394749739474974816870Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-125449
NC_016845:575123:598562598562599431870Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein8e-126449
NC_004631:4687270:469954046995404700415876Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-124446
CP002185:4750571:475615847561584757033876Escherichia coli W, complete genomehypothetical protein2e-124445
NC_006905:4638707:466016146601614661036876Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein4e-123441
NC_012125:4716000:473747647374764738351876Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-123441
NC_020211:554736:564967564967565842876Serratia marcescens WW4, complete genomeHNH nuclease3e-123441
NC_011147:4460726:448777644877764488651876Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-123440
NC_011149:4677412:470819447081944709069876Salmonella enterica subsp. enterica serovar Agona str. SL483,HNH nuclease8e-123439
NC_016816:3952000:395795439579543958823870Pantoea ananatis LMG 5342, complete genomeHNH nuclease3e-120431
NC_011294:4560902:458020745802074580917711Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-104379
NC_011205:4718239:473754547375454738255711Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-104379
NC_011080:4703266:472206147220614722759699Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-104377
NC_013421:1819036:182912118291211829996876Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-100365
NC_012912:4167429:418072641807264181598873Dickeya zeae Ech1591, complete genomehypothetical protein6e-97354
NC_016818:4215836:423289242328924233764873Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative restriction endonuclease7e-89327
NC_014306:4376012:439702443970244397896873Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein3e-87322
NC_010067:3056774:307063430706343071506873Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-80296
NC_020418:116500:120817120817121689873Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-78293
NC_014012:2411096:241959224195922420461870Shewanella violacea DSS12, complete genomehypothetical protein7e-77287
NC_014019:2711500:272741227274122728302891Bacillus megaterium QM B1551 chromosome, complete genomehypothetical protein2e-50199
NC_008826:13393:315363153632432897Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein2e-44179
NC_019940:2997439:300386230038623004743882Thioflavicoccus mobilis 8321 chromosome, complete genomerestriction endonuclease8e-31134
NC_020063:4127161:413034841303484131286939Enterobacteriaceae bacterium strain FGI 57, complete genomeputative restriction endonuclease8e-30130
NC_009921:3255833:326724432672443268158915Frankia sp. EAN1pec, complete genomerestriction endonuclease-like protein5e-27121
NC_017955:343931:349712349712350611900Modestobacter marinus, complete genomehypothetical protein1e-22107
NC_013361:5580741:558415055841505584368219Escherichia coli O26:H11 str. 11368 chromosome, complete genome4e-2099
NC_009937:4392108:440932444093244410223900Azorhizobium caulinodans ORS 571, complete genomehypothetical protein8e-1581.3
NC_007498:357484:3726873726873738111125Pelobacter carbinolicus DSM 2380, complete genomepredicted restriction endonuclease8e-1581.3
AP010958:5272863:529110352911035291279177Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-1480.5
NC_013353:5272863:529110352911035291279177Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-1480.5
NC_012918:928903:977172977172978152981Geobacter sp. M21 chromosome, complete genomeHNH nuclease3e-1479.3
NC_020156:1565500:158153715815371582511975Nonlabens dokdonensis DSW-6, complete genomeHNH endonuclease family protein4e-1479
NC_008609:1027838:105322410532241054204981Pelobacter propionicus DSM 2379, complete genomeHNH nuclease1e-1377.4
NC_002939:1480474:149317114931711494151981Geobacter sulfurreducens PCA, complete genomeHNH endonuclease family protein2e-1376.6
NC_011979:3070110:307674330767433077720978Geobacter sp. FRC-32, complete genomeHNH endonuclease8e-1374.7
NC_014638:183115:197199197199197990792Bifidobacterium bifidum PRL2010 chromosome, complete genometype II restriction-modification system restriction subunit7e-1374.7
NC_007517:1998342:201182620118262012278453Geobacter metallireducens GS-15, complete genome3e-1272.8
NC_017218:273503:280906280906281694789Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein3e-1272.4
NC_014169:231210:238629238629239417789Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease3e-1272.4
NC_008618:1526392:153285015328501533620771Bifidobacterium adolescentis ATCC 15703, complete genomepossible restriction endonuclease5e-1272
NC_011205:4718239:473738047373804737544165Salmonella enterica subsp. enterica serovar Dublin str. CT_020218539e-1271.2
NC_011080:4703266:472188447218844722051168Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1170.9
NC_008800:575141:589409589409590173765Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-1170.5
NC_015224:610807:622685622685623449765Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-1170.1
NC_013922:3290356:329704432970443297685642Natrialba magadii ATCC 43099 chromosome, complete genomerestriction endonuclease-like protein2e-1067
NC_014100:449541:462239462239463156918Caulobacter segnis ATCC 21756 chromosome, complete genomehypothetical protein2e-1067
NC_019673:2155669:2174364217436421756891326Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-1065.1
NC_014151:3611956:362318936231893624082894Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein7e-1065.1
NC_016948:2129335:214040021404002140924525Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein3e-0962.8
NC_007760:4055860:4069310406931040706981389Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein7e-0961.6
NC_017322:1260526:127283612728361273747912Sinorhizobium meliloti BL225C chromosome, complete genomehypothetical protein7e-0961.6
NC_018524:4235773:425573042557304256701972Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeHNH endonuclease family protein6e-0961.6
NC_008789:472500:485601485601486392792Halorhodospira halophila SL1, complete genomerestriction endonuclease-like protein8e-0961.2
NC_008529:1042220:105313110531311053916786Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted restriction endonuclease9e-0961.2
NC_011891:4450031:446755944675594468506948Anaeromyxobacter dehalogenans 2CP-1, complete genomerestriction endonuclease-like protein1e-0860.5
NC_010995:4460413:447291044729104473668759Cellvibrio japonicus Ueda107, complete genomehypothetical protein3e-0859.3
NC_014830:1602198:161001616100161610855840Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein1e-0757.4
NC_008825:1258500:129129912912991292225927Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-0756.2
NC_008826:170609:173764173764174690927Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein3e-0756.2
NC_014033:772754:784512784512785339828Prevotella ruminicola 23 chromosome, complete genomehypothetical protein3e-0755.8
NC_011060:330437:3420333420333430551023Pelodictyon phaeoclathratiforme BU-1, complete genomeHNH nuclease4e-0755.8
NC_019902:1681320:169583216958321696176345Thioalkalivibrio nitratireducens DSM 14787, complete genomerestriction endonuclease6e-0755.1
NC_011059:65414:693516935170124774Prosthecochloris aestuarii DSM 271, complete genomeputative restriction endonuclease7e-0754.7
NC_011144:1073944:108376110837611084681921Phenylobacterium zucineum HLK1, complete genomerestriction endonuclease7e-0754.7
NC_018581:2768743:282364528236452824526882Gordonia sp. KTR9 chromosome, complete genomeputative restriction endonuclease8e-0754.7
NC_011992:3375929:340591434059143406894981Acidovorax ebreus TPSY, complete genomerestriction endonuclease-like protein1e-0653.9