Pre_GI: BLASTP Hits

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Query: NC_008563:4707826:4729806 Escherichia coli APEC O1, complete genome

Start: 4729806, End: 4730723, Length: 918

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009438:212476:226933226933227853921Shewanella putrefaciens CN-32 chromosome, complete genomeglycyl-radical activating family protein5e-91334
NC_008750:450233:464493464493465413921Shewanella sp. W3-18-1, complete genomeglycyl-radical enzyme activating protein family5e-91334
NC_009454:2502724:253056025305602531471912Pelotomaculum thermopropionicum SI, complete genomepyruvate-formate lyase-activating enzyme2e-76286
NC_021182:4058873:406031340603134061218906Clostridium pasteurianum BC1, complete genomeglycyl-radical enzyme activator family protein1e-67256
NC_012108:481657:495044495044495952909Desulfobacterium autotrophicum HRM2, complete genomePflC12e-66252
NC_015573:2463123:250043325004332501374942Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeglycyl-radical enzyme activating protein family2e-66252
NC_009922:2556033:257209025720902573040951Alkaliphilus oremlandii OhILAs, complete genomeglycyl-radical enzyme activating protein family2e-63243
NC_016048:3856665:387205538720553872969915Oscillibacter valericigenes Sjm18-20, complete genomeglycyl-radical enzyme activating family protein2e-63242
NC_002937:2933000:293303029330302933953924Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completepyruvate formate-lyase 1 activating enzyme, putative7e-63241
NC_008751:607209:624617624617625540924Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeglycyl-radical enzyme activating protein family7e-63240
NC_021182:966839:969602969602970534933Clostridium pasteurianum BC1, complete genomeglycyl-radical enzyme activator family protein1e-62239
NC_021184:657093:657093657093658031939Desulfotomaculum gibsoniae DSM 7213, complete genomeglycyl-radical enzyme activator family protein1e-61236
NC_020063:3690308:371903437190343720008975Enterobacteriaceae bacterium strain FGI 57, complete genomeglycyl-radical enzyme activator family protein1e-60233
NC_021182:4058873:406569240656924066615924Clostridium pasteurianum BC1, complete genomeglycyl-radical enzyme activator family protein3e-59229
NC_009699:2287893:230355823035582304511954Clostridium botulinum F str. Langeland chromosome, complete genomeglycyl-radical enzyme activating family protein6e-58224
NC_012658:2295536:231172723117272312680954Clostridium botulinum Ba4 str. 657 chromosome, complete genomeglycyl-radical enzyme activating family protein9e-58224
NC_012563:2384500:239776123977612398714954Clostridium botulinum A2 str. Kyoto, complete genomeglycyl-radical enzyme activating family protein6e-58224
NC_010001:1745089:175808817580881759035948Clostridium phytofermentans ISDg, complete genomeglycyl-radical enzyme activating protein family6e-58224
NC_009697:2173000:218299921829992183952954Clostridium botulinum A str. ATCC 19397 chromosome, completeglycyl-radical enzyme activating family protein6e-58224
NC_009698:2171151:218321821832182184171954Clostridium botulinum A str. Hall chromosome, complete genomeglycyl-radical enzyme activating family protein6e-58224
NC_009495:2244774:225435722543572255319963Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeglycyl-radical activating family protein6e-58224
NC_014363:114239:141718141718142665948Olsenella uli DSM 7084 chromosome, complete genomeglycyl-radical enzyme activating protein family2e-57222
NC_009615:919495:924724924724925629906Parabacteroides distasonis ATCC 8503 chromosome, complete genomepyruvate-formate lyase-activating enzyme4e-57221
NC_014328:4316008:432998643299864330936951Clostridium ljungdahlii ATCC 49587 chromosome, complete genomepyruvate formate-lyase activating enzyme7e-57221
NC_010674:1496500:150598315059831506936954Clostridium botulinum B str. Eklund 17B, complete genomebenzylsuccinate synthase activating enzyme1e-56220
NC_016584:5625975:563927856392785640246969Desulfosporosinus orientis DSM 765 chromosome, complete genomeglycyl-radical enzyme activator family protein5e-56218
NC_010723:1465097:147619614761961477149954Clostridium botulinum E3 str. Alaska E43, complete genomeglycyl-radical enzyme activating family protein2e-55216
NC_009089:1283000:131846813184681319370903Clostridium difficile 630, complete genomeglycerol dehydratase activator1e-55216
NC_004557:1553000:156226215622621563224963Clostridium tetani E88, complete genomebenzylsuccinate synthase activating enzyme5e-55214
NC_015577:3621777:364344236434423644344903Treponema azotonutricium ZAS-9 chromosome, complete genomepyruvate formate-lyase-activating enzyme7e-55214
NC_021184:657093:670474670474671469996Desulfotomaculum gibsoniae DSM 7213, complete genomeglycyl-radical enzyme activator family protein2e-54212
NC_014364:4488875:450773445077344508657924Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeglycyl-radical enzyme activating protein family4e-54211
NC_009633:3933941:394874939487493949696948Alkaliphilus metalliredigens QYMF chromosome, complete genomeglycyl-radical activating family protein7e-51201
NC_016938:193000:211219211219211995777Melissococcus plutonius DAT561 chromosome 1, complete genomepyruvate formate-lyase activating enzyme5e-51201
NC_014328:2872721:287420728742072875118912Clostridium ljungdahlii ATCC 49587 chromosome, complete genomepyruvate formate-lyase activating enzyme9e-49194
NC_012470:2021316:202131620213162022089774Streptococcus equi subsp. zooepidemicus, complete genomepyruvate formate-lyase activating enzyme2e-48192
NC_015424:2917817:293754229375422938438897Aeromonas veronii B565 chromosome, complete genomepyruvate formate-lyase 2-activating enzyme3e-48192
NC_013517:2055071:205983920598392060660822Sebaldella termitidis ATCC 33386, complete genomeglycyl-radical enzyme activating protein family3e-48192
AP010958:922937:947234947234948133900Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted pyruvate formate lyase activating enzyme1e-47190
NC_013353:922937:947234947234948133900Escherichia coli O103:H2 str. 12009, complete genomepyruvate formate lyase activating enzyme1e-47190
NC_013364:928486:951505951505952404900Escherichia coli O111:H- str. 11128, complete genomeputative pyruvate formate lyase activating enzyme1e-47190
NC_010001:1488000:149196114919611492752792Clostridium phytofermentans ISDg, complete genomeglycyl-radical enzyme activating protein family1e-46186
NC_014624:2297000:230867423086742309594921Eubacterium limosum KIST612 chromosome, complete genomeputative pyruvate-formate lyase-activating enzyme2e-45182
NC_019970:35985:607916079161519729Thermoanaerobacterium thermosaccharolyticum M0795, complete genomepyruvate formate-lyase 1-activating enzyme3e-37155
NC_014410:51711:749047490475632729Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,pyruvate formate-lyase activating enzyme8e-36150
NC_014393:1421122:142540714254071426303897Clostridium cellulovorans 743B chromosome, complete genomeRadical SAM domain-containing protein1e-35150
NC_015555:49842:739707397074698729Thermoanaerobacterium xylanolyticum LX-11 chromosome, completepyruvate formate-lyase activating enzyme3e-35149
NC_011094:1050700:106119810611981061995798Salmonella enterica subsp. enterica serovar Schwarzengrund strpyruvate formate lyase-activating enzyme 12e-34146
NC_015709:1769806:179812517981251798919795Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completepyruvate formate-lyase activating enzyme4e-34145
NC_009801:995396:9998659998651000662798Escherichia coli E24377A, complete genomepyruvate formate-lyase 1-activating enzyme6e-34144
NC_007712:1601499:162391816239181624658741Sodalis glossinidius str. 'morsitans', complete genomepyruvate formate-lyase 1 activating enzyme1e-31136
NC_014614:2500301:252580225258022526560759Clostridium sticklandii, complete genomepyruvate formate lyase activating enzyme 13e-31135
NC_010159:1668795:167164316716431672377735Yersinia pestis Angola, complete genomepyruvate formate-lyase 1-activating enzyme9e-31134
NC_013410:1285857:129149512914951292271777Fibrobacter succinogenes subsp. succinogenes S85 chromosome,pyruvate formate-lyase activating enzyme7e-31134
NC_018750:3315309:332659433265943327406813Streptomyces venezuelae ATCC 10712, complete genomePyruvate formate-lyase activating enzyme9e-30130
NC_015061:1598920:160241216024121603209798Rahnella sp. Y9602 chromosome, complete genomepyruvate formate-lyase activating enzyme2e-29130
NC_016818:1605918:160938716093871610184798Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completepyruvate formate-lyase activating enzyme2e-29130
NC_017047:1551836:155532815553281556068741Rahnella aquatilis HX2 chromosome, complete genomepyruvate formate lyase-activating enzyme 12e-29129
NC_009831:2045811:204581120458112046551741Shewanella sediminis HAW-EB3, complete genome(Formate-C-acetyltransferase)-activating enzyme2e-28126
NC_004347:3028000:304450830445083045248741Shewanella oneidensis MR-1, complete genomepyruvate formate-lyase 1 activating enzyme2e-28126
NC_014376:317312:336200336200336973774Clostridium saccharolyticum WM1 chromosome, complete genomepyruvate formate-lyase activating enzyme2e-28126
NC_010001:3421710:344193634419363442688753Clostridium phytofermentans ISDg, complete genomepyruvate formate-lyase activating enzyme2e-28126
NC_015460:418826:434556434556435296741Gallibacterium anatis UMN179 chromosome, complete genomepyruvate formate lyase-activating enzyme 15e-28125
NC_015275:1223088:124302112430211243746726Clostridium lentocellum DSM 5427 chromosome, complete genomepyruvate formate-lyase activating enzyme2e-27122
NC_016627:1960097:197152619715261972368843Clostridium clariflavum DSM 19732 chromosome, complete genomeglycine radical enzyme activase, YjjW family5e-27122
NC_009012:1901492:190757919075791908421843Clostridium thermocellum ATCC 27405, complete genomeRadical SAM5e-27121
NC_006448:1451729:145231514523151453115801Streptococcus thermophilus LMG 18311, complete genomepyruvate-formate lyase activating enzyme9e-27120
NC_013716:5141269:516390851639085164771864Citrobacter rodentium ICC168, complete genomeradical SAM superfamily protein1e-26120
NC_008618:1206157:122747812274781228356879Bifidobacterium adolescentis ATCC 15703, complete genomepyruvate formate-lyase 1 activating enzyme2e-24112
NC_013093:2633000:267457826745782675423846Actinosynnema mirum DSM 43827, complete genomepyruvate formate-lyase activating enzyme4e-24112
NC_014033:1808782:183079218307921831628837Prevotella ruminicola 23 chromosome, complete genomeradical SAM domain-containing protein5e-24112
NC_013714:1521404:154305415430541543935882Bifidobacterium dentium Bd1, complete genomepflA1 Pyruvate formate-lyase activating enzyme1e-22107
NC_015500:311845:324489324489325265777Treponema brennaborense DSM 12168 chromosome, complete genome(Formate-C-acetyltransferase)-activating enzyme1e-22107
NC_014618:4010689:404083540408354041698864Enterobacter cloacae SCF1 chromosome, complete genomeradical SAM protein4e-21102
NC_014933:2240000:224205322420532242778726Bacteroides helcogenes P 36-108 chromosome, complete genomepyruvate formate-lyase activating enzyme1e-1997.4
NC_015578:423000:423018423018423869852Treponema primitia ZAS-2 chromosome, complete genomeradical SAM1e-1997.4
NC_004461:205068:205068205068205823756Staphylococcus epidermidis ATCC 12228, complete genomeformate acetyltransferase activating enzyme1e-1894.4
NC_004603:1464000:146656414665641467445882Vibrio parahaemolyticus RIMD 2210633 chromosome I, completepyruvate formate lyase activating enzyme5e-1892
NC_017343:224777:227049227049227804756Staphylococcus aureus subsp. aureus ECT-R 2, complete genomepyruvate formate-lyase activating enzyme7e-1788.2
NC_016605:233087:236623236623237444822Pediococcus claussenii ATCC BAA-344 chromosome, complete genomepyruvate formate-lyase activating enzyme9e-1787.8
NC_014761:1795304:1802288180228818033611074Oceanithermus profundus DSM 14977 chromosome, complete genomeradical sam domain protein8e-0857.8
NC_000909:446364:455930455930456421492Methanocaldococcus jannaschii DSM 2661, complete genomepolyferredoxin (mvhB)2e-0756.6
NC_015949:2002752:2019401201940120205281128Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomehypothetical protein2e-0756.6
NC_014507:1610409:163142716314271631813387Methanoplanus petrolearius DSM 11571 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein3e-0756.2
NC_014652:666227:6687846687846699111128Caldicellulosiruptor hydrothermalis 108 chromosome, completehypothetical protein3e-0756.2
NC_014933:270000:291573291573291743171Bacteroides helcogenes P 36-108 chromosome, complete genomeferredoxin4e-0755.8
NC_006347:700838:703656703656703826171Bacteroides fragilis YCH46, complete genomeferredoxin6e-0755.1
NC_014033:675626:675626675626676489864Prevotella ruminicola 23 chromosome, complete genomeradical SAM domain-containing protein7e-0755.1
NC_014328:85290:860978609786831735Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein1e-0654.3
NC_013757:2659930:2659930265993026610301101Geodermatophilus obscurus DSM 43160, complete genomeRadical SAM domain protein1e-0654.3
NC_013887:245236:276610276610277101492Methanocaldococcus sp. FS406-22 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0653.9
NC_015589:2049328:2073624207362420747301107Desulfotomaculum ruminis DSM 2154 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein1e-0653.9
NC_018515:989616:100388310038831004824942Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeoxidoreductase of aldo/keto reductase family1e-0653.9
NC_011661:1100576:1113734111373411150471314Dictyoglomus turgidum DSM 6724, complete genomeelectron transport complex, RnfABCDGE type, C subunit3e-0653.1
NC_014973:1598429:1622245162224516235701326Geobacter sp. M18 chromosome, complete genomeelectron transfer flavoprotein alpha/beta-subunit3e-0653.1
NC_015416:2723189:2766018276601827684532436Methanosaeta concilii GP-6 chromosome, complete genomeCoB--CoM heterodisulfide reductase subunit A3e-0652.8
NC_014844:3538432:354014135401413540575435Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein3e-0652.8
NC_010001:2125500:213642321364232136785363Clostridium phytofermentans ISDg, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein3e-0652.8
NC_015660:1784553:179843217984321798950519Geobacillus thermoglucosidasius C56-YS93 chromosome, complete4Fe-4S ferredoxin iron-sulfur binding domain-containing protein4e-0652.4
NC_014650:1763308:177721317772131777731519Geobacillus sp. Y4.1MC1 chromosome, complete genomeformate hydrogenlyase complex iron-sulfur subunit4e-0652.4
NC_008570:2768795:278904827890482789605558Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehydrogenase-4 component H5e-0652
NC_015424:2357600:238695223869522387509558Aeromonas veronii B565 chromosome, complete genomehydrogenase-4 component H6e-0652
NC_012034:390273:413363413363414211849Anaerocellum thermophilum DSM 6725, complete genomeRadical SAM domain protein6e-0651.6
NC_007681:218921:2386392386392397421104Methanosphaera stadtmanae DSM 3091, complete genomepredicted Fe-S center containing protein6e-0651.6