Pre_GI: BLASTP Hits

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Query: NC_008563:4707826:4727190 Escherichia coli APEC O1, complete genome

Start: 4727190, End: 4727711, Length: 522

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3405520:340608734060873406608522Escherichia coli ED1a chromosome, complete genomeputative maturase-related protein9e-91332
NC_004431:4319152:432111043211104321631522Escherichia coli CFT073, complete genomePutative maturase-related protein9e-91332
NC_013223:2609697:2610769261076926121691401Desulfohalobium retbaense DSM 5692, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-47188
NC_016593:416661:4367304367304379891260Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completereverse transcriptase (RNA-dependent DNA polymerase)3e-42171
NC_016593:1713000:1726122172612217273811260Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completereverse transcriptase (RNA-dependent DNA polymerase)3e-42171
NC_010337:1051425:1054702105470210561291428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)8e-42169
NC_010337:1:2217622176236031428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)8e-42169
NC_010337:1051425:1056587105658710580141428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)8e-42169
NC_015555:49842:4843948439498451407Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA-directed DNA polymerase (Reverse transcriptase)8e-42169
NC_019970:439969:4441624441624455681407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase6e-42169
NC_019970:2080419:2095698209569820971041407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase4e-41167
NC_019970:2551607:2574597257459725760031407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase4e-41167
NC_019970:510632:5207095207095221151407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase4e-41167
NC_013921:1977444:1977444197744419788561413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-40165
NC_013921:2293411:2294928229492822963401413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-40165
NC_013921:1396500:1396798139679813982101413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-40165
NC_013921:1396500:1400425140042514018371413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-40165
NC_013921:80856:1000881000881015001413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-40165
NC_006177:2883476:2925725292572529269871263Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase, N-terminally truncated1e-40165
NC_006177:12383:3152131521328101290Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase1e-40165
NC_006177:1254635:1256307125630712575961290Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase1e-40165
NC_006177:2883476:2925688292568829270081321Symbiobacterium thermophilum IAM 14863, complete genome1e-40165
NC_015958:677500:6866716866716880831413Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeRNA-directed DNA polymerase1e-40165
NC_014964:923681:9315429315429329541413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase1e-40165
NC_014964:35862:4562345623470351413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase1e-40165
NC_010321:35855:4561645616470281413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase1e-40165
NC_010321:2276000:2283171228317122845831413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase1e-40165
NC_006177:2398482:240063724006372401557921Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase variant3e-40164
NC_014538:187747:1949691949691963811413Thermoanaerobacter sp. X513 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-40164
NC_010320:143109:1551031551031565151413Thermoanaerobacter sp. X514 chromosome, complete genomeRNA-directed DNA polymerase2e-40164
NC_013411:3201331:3211428321142832126901263Geobacillus sp. Y412MC61, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-40163
NC_014915:3207300:3217397321739732186591263Geobacillus sp. Y412MC52 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-40163
NC_009483:4885914:4912253491225349136561404Geobacter uraniireducens Rf4 chromosome, complete genomeRNA-directed DNA polymerase7e-40162
NC_009483:2489000:2512349251234925137521404Geobacter uraniireducens Rf4 chromosome, complete genomeRNA-directed DNA polymerase7e-40162
NC_007645:4677965:4684237468423746856251389Hahella chejuensis KCTC 2396, complete genomegroup II intron-encoding maturase1e-39161
NC_016935:1636278:1636278163627816376691392Paenibacillus mucilaginosus 3016 chromosome, complete genomeRNA-directed DNA polymerase1e-37155
NC_002947:737924:7418987418987433191422Pseudomonas putida KT2440, complete genomegroup II intron-encoding maturase1e-37155
NC_002570:126500:1307001307001319561257Bacillus halodurans C-125, complete genometransposase (11)9e-38155
NC_004193:79588:8221182211834701260Oceanobacillus iheyensis HTE831, complete genomerecombinase for Bh.Int6e-37153
NC_019897:128610:1414831414831428741392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase1e-36152
NC_019897:128610:1464991464991478901392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase1e-36152
NC_014366:3653190:3655631365563136569201290Gamma proteobacterium HdN1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)3e-36150
NC_014366:3653190:3667976366797636692651290Gamma proteobacterium HdN1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)3e-36150
NC_014366:3653190:367488436748843675681798Gamma proteobacterium HdN1, complete genome5e-36150
NC_008782:2326439:2354027235402723554481422Acidovorax sp. JS42, complete genomeRNA-directed DNA polymerase1e-35149
NC_013385:1064188:1080741108074110820811341Ammonifex degensii KC4, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-35147
NC_020291:5641444:5645748564574856471061359Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeretron-type reverse transcriptase2e-33142
NC_020210:3246839:325217232521723252822651Geobacillus sp. GHH01, complete genomeputative reverse transcriptase4e-33140
NC_018645:2390032:2405637240563724069771341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase3e-32137
NC_018645:2390032:2395599239559923969391341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase3e-32137
NC_018645:2390032:2393152239315223944921341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase3e-32137
NC_018645:3029785:3047408304740830487481341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase3e-32137
NC_018645:2390032:2399461239946124008011341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase3e-32137
NC_018645:2390032:2397530239753023988701341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase3e-32137
NC_010003:449192:4602484602484616661419Petrotoga mobilis SJ95, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-31134
NC_015425:2528549:2567779256777925692361458Clostridium botulinum BKT015925 chromosome, complete genomeRNA-directed DNA polymerase2e-31134
NC_014654:646500:6493246493246507391416Halanaerobium sp. 'sapolanicus' chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-30132
NC_010718:1454087:1459727145972714611541428Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-28124
NC_013851:3321853:3347636334763633489971362Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-27122
NC_010321:2276000:227803822780382278652615Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completematurase-specific domain-containing protein4e-27120
NC_015697:1480552:1486760148676014881421383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase5e-27120
NC_007907:5185510:5193267519326751945861320Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-26119
NC_008346:2251353:2254331225433122557791449Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein1e-26119
NC_008346:1431051:1443157144315714446051449Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein1e-26119
NC_010609:1077453:1088145108814510895271383Lactobacillus reuteri JCM 1112, complete genomereverse transcriptase/maturase6e-27119
NC_015697:742500:7537557537557551371383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase6e-27119
NC_015697:116000:1254021254021267841383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase6e-27119
NC_002939:2697767:2709108270910827104121305Geobacter sulfurreducens PCA, complete genomegroup II intron, maturase2e-26118
NC_002939:1021297:1029182102918210304861305Geobacter sulfurreducens PCA, complete genomegroup II intron, maturase2e-26118
NC_019903:175481:1897791897791911851407Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,Retron-type reverse transcriptase1e-25115
NC_015697:256000:2619622619622632061245Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase1e-25115
NC_011830:3025437:3041551304155130429601410Desulfitobacterium hafniense DCB-2, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-25115
NC_007907:1940000:1956132195613219574271296Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-25115
NC_014655:17641:2888228882303301449Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase (reverse transcriptase)7e-25113
NC_014973:3414459:3442836344283634441761341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase3e-24111
NC_015164:2961906:2984079298407929854161338Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-24110
NC_014219:2253023:2259161225916122604291269Bacillus selenitireducens MLS10 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-24110
NC_014973:4503054:4518889451888945202291341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase3e-24110
NC_014973:1257625:1266921126692112682611341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase3e-24110
NC_014973:2425994:2433276243327624346161341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase3e-24110
NC_014973:1257625:1272068127206812734081341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase3e-24110
NC_014219:894829:9021689021689034361269Bacillus selenitireducens MLS10 chromosome, complete genome9e-23106
NC_016023:1143130:1153368115336811547771410Bacillus coagulans 36D1 chromosome, complete genomeRNA-directed DNA polymerase3e-22104
NC_014219:2875051:2892888289288828941561269Bacillus selenitireducens MLS10 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-22103
NC_014538:73272:820168201682402387Thermoanaerobacter sp. X513 chromosome, complete genome2e-21102
NC_016052:2335648:2342202234220223435001299Tetragenococcus halophilus NBRC 12172, complete genomereverse transcriptase/maturase3e-21101
NC_004116:1234712:1244650124465012459271278Streptococcus agalactiae 2603V/R, complete genomeGBSi1, group II intron, maturase6e-21100
NC_013194:4964000:4991894499189449931561263Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeRNA-directed DNA polymerase (Reverse transcriptase)6e-2096.7
NC_010322:1817598:182825518282551828773519Pseudomonas putida GB-1 chromosome, complete genomegroup II intron maturase-specific domain-containing protein1e-1996.3
NC_013851:949973:9619009619009632551356Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1996.3
NC_019902:2372097:2380328238032823815751248Thioalkalivibrio nitratireducens DSM 14787, complete genomeRetron-type reverse transcriptase1e-1995.5
CU928159:30700:3070030700317401041Escherichia coli str. 55989 plasmid 55989p, complete genomeRNA-directed DNA polymerase (Reverse transcriptase) (fragment)2e-1995.1
NC_016826:1783828:179112017911201791677558Streptococcus infantarius subsp. infantarius CJ18 chromosome,Retron-type reverse transcriptase4e-1994
NC_017338:793024:8022388022388035241287Staphylococcus aureus subsp. aureus JKD6159 chromosome, completereverse transcriptase, group II intron2e-1891.7
NC_010337:616304:6364406364406375641125Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase family protein3e-1890.9
NC_019978:2220863:2222614222261422237771164Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase4e-1890.9
NC_020304:3029243:3041756304175630431051350Desulfocapsa sulfexigens DSM 10523, complete genomeRetron-type reverse transcriptase4e-1890.9
NC_014934:3751612:376999537699953770795801Cellulophaga algicola DSM 14237 chromosome, complete genome5e-1890.5
NC_019978:416637:4230104230104241611152Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase4e-1890.5
NC_017098:1149145:1161306116130611625891284Spirochaeta africana DSM 8902 chromosome, complete genomeRetron-type reverse transcriptase7e-1889.7
NC_015690:1186545:123960612396061240121516Paenibacillus mucilaginosus KNP414 chromosome, complete genomegroup II intron-encoding maturase8e-1889.7
NC_019978:1477724:1484210148421014853611152Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase3e-1787.8
NC_014219:2491021:2497495249749524986931199Bacillus selenitireducens MLS10 chromosome, complete genome1e-1685.9
NC_014829:1526401:1533531153353115348561326Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-1684.3
NC_010718:2513917:2535266253526625365341269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-1683.6
NC_010718:1959517:1966127196612719673951269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-1683.6
NC_014219:975660:9947489947489960751328Bacillus selenitireducens MLS10 chromosome, complete genome2e-1581.6
NC_014387:1528000:1528019152801915294131395Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeRNA-dependent DNA polymerase3e-1374.7
NC_015737:1441086:1452717145271714539881272Clostridium sp. SY8519, complete genomehypothetical protein3e-1374.3
NC_019978:39000:5139351393525081116Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase4e-1167.4
NC_016052:82358:971759717598035861Tetragenococcus halophilus NBRC 12172, complete genomereverse transcriptase/maturase9e-1166.2
NC_012656:1:6942694287501809Bacillus anthracis str. A0248 plasmid pXO1, complete sequencereverse transcriptase/endonuclease protein2e-0962
NC_012579:1:6903690387111809Bacillus anthracis str. CDC 684 plasmid pX01, complete sequencereverse transcriptase/endonuclease protein2e-0962
NC_014331:1:6728672885361809Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, completereverse transcriptase/endonuclease protein2e-0962
NC_007322:1:6678667884861809Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, completereverse transcriptase/endonuclease protein, (pxo1-07)2e-0962
NC_009454:2502724:2519632251963225209181287Pelotomaculum thermopropionicum SI, complete genomeretron-type reverse transcriptase2e-0961.6
NC_010981:242500:2849612849612863041344Wolbachia pipientis, complete genomeputative reverse transcriptase3e-0961.2
NC_008576:2458573:2464162246416224654631302Magnetococcus sp. MC-1, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0858.5
NC_010321:2276000:228183622818362282342507Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeretron-type reverse transcriptase-like protein7e-0856.6
NC_013194:2020134:202348820234882024063576Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeGroup II intron maturase-specific domain protein2e-0755.1
NC_007298:750361:7604137604137617021290Dechloromonas aromatica RCB, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0755.1
NC_019978:1477724:1477724147772414790131290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase3e-0754.7
NC_019978:1477724:1479685147968514809741290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase3e-0754.7
NC_014973:493500:5072475072475085841338Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase3e-0754.7
NC_010627:233572:2353602353602368711512Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceRNA-directed DNA polymerase4e-0754.3
NC_009614:4201098:4214682421468242163371656Bacteroides vulgatus ATCC 8482 chromosome, complete genomereverse transcriptase3e-0754.3
NC_009614:2723262:2750847275084727525021656Bacteroides vulgatus ATCC 8482 chromosome, complete genomereverse transcriptase5e-0753.9
NC_003078:671000:6755736755736768321260Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative reverse transcriptasematurase protein6e-0753.5
NC_008095:2420066:2434296243429624356061311Myxococcus xanthus DK 1622, complete genomegroup II intron, maturase8e-0753.1
NC_008095:4189082:4209761420976142110711311Myxococcus xanthus DK 1622, complete genomegroup II intron, maturase8e-0753.1
NC_015733:864959:8899838899838912151233Pseudomonas putida S16 chromosome, complete genomereverse transcriptase1e-0652.8
NC_017986:331610:3373573373573386101254Pseudomonas putida ND6 chromosome, complete genomereverse transcriptase1e-0652.8
NC_015733:3736104:3764353376435337656061254Pseudomonas putida S16 chromosome, complete genomereverse transcriptase1e-0652.8
NC_004663:2859158:2871211287121128728691659Bacteroides thetaiotaomicron VPI-5482, complete genomeputative reverse transcriptase1e-0652.4
NC_015942:2293455:2310449231044923117741326Acidithiobacillus ferrivorans SS3 chromosome, complete genomeRNA-directed DNA polymerase3e-0651.6
NC_007498:2638671:2649707264970726510471341Pelobacter carbinolicus DSM 2380, complete genomeprophage LambdaSa1, reverse transcriptase/maturase family protein3e-0651.2
NC_004116:560893:5693965693965707151320Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa1, reverse transcriptase/maturase family protein3e-0651.2
NC_014098:3030274:303684330368433037268426Bacillus tusciae DSM 2912 chromosome, complete genome3e-0651.2
NC_019897:1224798:125626912562691257267999Thermobacillus composti KWC4 chromosome, complete genome4e-0650.8
NC_015914:4248000:4259490425949042607521263Cyclobacterium marinum DSM 745 chromosome, complete genomeRNA-directed DNA polymerase5e-0650.4
NC_015914:4248000:4265401426540142666631263Cyclobacterium marinum DSM 745 chromosome, complete genomeRNA-directed DNA polymerase6e-0650.4