Pre_GI: BLASTP Hits

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Query: NC_008563:3888232:3896223 Escherichia coli APEC O1, complete genome

Start: 3896223, End: 3897125, Length: 903

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:3799788:381094738109473811873927Escherichia coli S88 chromosome, complete genomephosphotransferase system enzyme IID1e-154545
NC_007946:3855445:386362838636283864338711Escherichia coli UTI89, complete genomeputative phosphotransferase system protein3e-113408
NC_004631:3841975:386377538637753864632858Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative PTS system protein5e-49194
NC_003198:3855157:387828538782853879142858Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system protein5e-49194
NC_009792:4693152:470986447098644710724861Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-46187
NC_014377:1897857:190925419092541910114861Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system IID component, Man family (TC 4.A.6)3e-41169
NC_009089:581655:583393583393584232840Clostridium difficile 630, complete genomePTS system, IId component2e-37156
NC_015389:809474:817609817609818496888Coriobacterium glomerans PW2 chromosome, complete genomePTS system IID component, Man family2e-34146
NC_015519:270637:287720287720288547828Tepidanaerobacter sp. Re1 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID2e-31135
NC_016023:875416:883779883779884585807Bacillus coagulans 36D1 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID6e-31134
NC_014334:2696000:2706521270652127082151695Lactobacillus casei str. Zhang chromosome, complete genomePTS system mannose-specific transporter subunit IICD4e-29128
NC_013198:394000:4184674184674201551689Lactobacillus rhamnosus GG, complete genomePTS system, mannose-specific IICD component4e-27122
NC_008526:343445:3656743656743672721599Lactobacillus casei ATCC 334, complete genomeMannose-specific PTS system component IICD3e-25115
NC_011149:4474012:449142044914204492292873Salmonella enterica subsp. enterica serovar Agona str. SL483,fructose permease iid component9e-25114
NC_012880:2399205:240318524031852404024840Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IID subunit4e-24112
NC_016818:3148000:315008931500893150931843Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IID5e-24111
NC_011294:4604283:462884346288434629679837Salmonella enterica subsp. enterica serovar Enteritidis strPTS system transporter subunit D2e-23110
NC_017047:3212000:321415532141553214997843Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IID4e-23108
NC_015061:3147691:314955331495533150395843Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IID subunit4e-23108
NC_014106:419511:452561452561453481921Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IID component5e-21102
NC_006814:403723:441344441344442282939Lactobacillus acidophilus NCFM, complete genomemannose-specific PTS system component IID1e-20100
NC_015389:1977736:200684920068492007703855Coriobacterium glomerans PW2 chromosome, complete genomePTS system IID component, Man family1e-20100
NC_015214:437733:476722476722477642921Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, mannose-specific IID component2e-2099.8
NC_014724:439594:477107477107478027921Lactobacillus amylovorus GRL 1112 chromosome, complete genomePTS system, mannose-specific IID component2e-2099.8
NC_013192:2434664:245197524519752452808834Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IID subunit5e-2098.6
NC_018528:1681060:168733116873311688251921Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannose family transporter subunit IID2e-1996.3
NC_015602:1339067:134426113442611345181921Lactobacillus kefiranofaciens ZW3 chromosome, complete genomePTS system, mannose-specific IID component4e-1995.5
NC_012962:869295:883460883460884302843Photorhabdus asymbiotica, complete genomepts system, n-acetylgalactosamine-specific iid component (eiid-aga (n-acetylgalactosamine-permease iid component) (phosphotransferas enzyme ii, d comp2e-1893.6
NC_009617:4436837:445046144504614451282822Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID2e-1893.6
NC_005126:949226:968992968992969885894Photorhabdus luminescens subsp. laumondii TTO1, complete genomePTS system, N-acetylgalactosamine-specific IID component (EIID-AGA) (N-acetylgalactosamine-permease IID component) (Phosphotransferase enzyme II, D co2e-1893.2
NC_005139:518760:527148527148528032885Vibrio vulnificus YJ016 chromosome I, complete sequencephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID3e-1892.8
NC_013199:392450:412726412726413574849Lactobacillus rhamnosus Lc 705, complete genomePTS system, mannose/fructose/sorbose IID component3e-1892.4
NC_012967:3191319:321439832143983215276879Escherichia coli B str. REL606 chromosome, complete genomePTS system, N-acetylgalactosamine-specific IID component6e-1891.7
CP002185:3475991:349917434991743500052879Escherichia coli W, complete genomeN-acetylgalactosamine-specific IID component6e-1891.7
NC_013504:1648551:165526816552681656197930Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probably mannose specific3e-1789.4
NC_005362:1870620:187627718762771877206930Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIID probable mannose specific5e-1788.6
NC_008530:1775841:178007817800781781007930Lactobacillus gasseri ATCC 33323, complete genomemannose-specific PTS system component IID6e-1788.2
NC_004337:3249791:327202832720283272837810Shigella flexneri 2a str. 301, complete genomeputative transport enzyme subunit8e-1787.8
NC_010067:1116148:112641511264151127305891Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1687
NC_014376:4369666:437043543704354371226792Clostridium saccharolyticum WM1 chromosome, complete genomePTS system mannose/fructose/sorbose family IID component2e-1686.7
NC_013192:469771:483533483533484450918Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IID subunit4e-1685.5
NC_015424:2357600:237836123783612379137777Aeromonas veronii B565 chromosome, complete genomePTS system, IID component7e-1684.7
NC_013171:228356:228356228356229294939Anaerococcus prevotii DSM 20548, complete genomePTS system mannose/fructose/sorbose family IID component1e-1584
NC_016612:2902628:292990929299092930757849Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID1e-1584
NC_010723:1379256:139967813996781400622945Clostridium botulinum E3 str. Alaska E43, complete genomePTS system, mannose/fructose/sorbose family, IID component3e-1582.8
NC_010380:124655:147184147184147999816Streptococcus pneumoniae Hungary19A-6, complete genomePTS system, IID component8e-1581.3
NC_011660:2509362:251640625164062517317912Listeria monocytogenes HCC23 chromosome, complete genomePTS system fructose-specific transporter subunit IID2e-1479.7
NC_015975:1936504:195040519504051951319915Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS family mannose/fructose/sorbose porter component IID2e-1376.6
NC_011134:1222739:122454512245451225333789Streptococcus equi subsp. zooepidemicus str. MGCS10565, completemannose permease IID component ManZ7e-1374.7
NC_016023:1769925:178811317881131788934822Bacillus coagulans 36D1 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID1e-1274.3
NC_009442:1158268:116443711644371165252816Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID2e-1273.6
NC_008261:967973:970981970981971892912Clostridium perfringens ATCC 13124, complete genomePTS system, mannose/fructose/sorbose family, IID component6e-1271.6
NC_020063:4653422:466958146695814670423843Enterobacteriaceae bacterium strain FGI 57, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID1e-1170.5
NC_015389:1782825:179819117981911799054864Coriobacterium glomerans PW2 chromosome, complete genomePTS system IID component, Man family7e-1168.2
NC_017328:3289853:3311322331132233127791458Shigella flexneri 2002017 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IID5e-1065.5
NC_015425:841754:855681855681856496816Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIC1e-0757