Pre_GI: BLASTP Hits

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Query: NC_008563:2946391:2949144 Escherichia coli APEC O1, complete genome

Start: 2949144, End: 2949707, Length: 564

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:2863316:286645528664552867018564Escherichia coli S88 chromosome, complete genomenucleic acid-binding protein; e14 prophage4e-107386
NC_007946:2931364:293411729341172934680564Escherichia coli UTI89, complete genomehypothetical protein YmfL4e-107386
NC_004431:3040953:305834630583463058954609Escherichia coli CFT073, complete genomeHypothetical protein ymfL4e-106383
NC_011740:4520373:451971145197114520376666Escherichia fergusonii ATCC 35469, complete genomeputative nucleic acid-binding protein; e14 prophage2e-105380
AC_000091:1191353:120483312048331205402570Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator1e-101368
NC_000913:1188999:120247912024791203048570Escherichia coli K12, complete genomee14 prophage; predicted DNA-binding transcriptional regulator1e-101368
NC_011742:4962008:496146049614604962011552Escherichia coli S88 chromosome, complete genomenucleic acid-binding protein; e14 prophage6e-94342
NC_008563:5011997:501144950114495012000552Escherichia coli APEC O1, complete genomehypothetical protein6e-94342
NC_009778:959982:978440978440978991552Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-65246
NC_013716:2764550:276455027645502765107558Citrobacter rodentium ICC168, complete genomeputative prophage DNA-binding protein8e-63239
NC_011750:5045927:506138050613805061955576Escherichia coli IAI39 chromosome, complete genome2e-61234
NC_020181:5217000:523572752357275236278552Enterobacter aerogenes EA1509E, complete genomehypothetical protein6e-61233
NC_012731:2083650:209900220990022099604603Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein7e-60229
NC_014562:983398:993974993974994462489Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein ymfL6e-57219
NC_011750:5045927:506007950600795060303225Escherichia coli IAI39 chromosome, complete genome3e-28124
NC_012559:854507:867935867935868387453Laribacter hongkongensis HLHK9, complete genomehypothetical protein1e-1789.7
NC_017060:59500:101741101741102247507Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein3e-1168.2
NC_015062:99969:102945102945103451507Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein1e-0963.2
NC_015410:2351464:237516823751682375647480Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein3e-0961.6
NC_017047:1906000:190835419083541908860507Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-0756.2
NC_009436:2776410:281730628173062817776471Enterobacter sp. 638, complete genomehypothetical protein1e-0653.1
NC_011770:2690501:270399527039952704459465Pseudomonas aeruginosa LESB58, complete genomehypothetical protein2e-0652