Pre_GI: BLASTN Hits

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Query: NC_008544:818730 Burkholderia cenocepacia HI2424 chromosome 3, complete sequence

Start: 818730, End: 840786, Length: 22057

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011138:3182807*3182807321165528849Alteromonas macleodii 'Deep ecotype', complete genome8e-22113BLASTN svgBLASTP svg
NC_002927:43927684392768441559922832Bordetella bronchiseptica RB50, complete genome8e-19103BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010170:3908500*3908500394194933450Bordetella petrii, complete genome2e-31145BLASTN svgBLASTP svg
NC_008060:13465811346581136716420584Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence030150BLASTN svgBLASTP svg
NC_010508:18656021865602188921923618Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-77297BLASTN svgBLASTP svg
NC_010515:16784871678487173009951613Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_008391:69922269922271789818677Burkholderia cepacia AMMD chromosome 2, complete sequence02224BLASTN svgBLASTP svg
NC_012720:11448911448914149927011Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_007434:22909342290934231209021157Burkholderia pseudomallei 1710b chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_006350:1938631*1938631199668958059Burkholderia pseudomallei K96243 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_007511:17805001780500180270922210Burkholderia sp. 383 chromosome 2, complete sequence1e-66262BLASTN svgBLASTP svg
NC_007509:64400064400066633222333Burkholderia sp. 383 chromosome 3, complete sequence02014BLASTN svgBLASTP svg
NC_020181:1653261*1653261168347330213Enterobacter aerogenes EA1509E, complete genome7e-0763.9BLASTN svgBLASTP svg
CU928145:46959324695932471752121590Escherichia coli 55989 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011748:46959324695932471752121590Escherichia coli 55989, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010468:43051054305105432709121987Escherichia coli ATCC 8739, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009801:46430004643000466340420405Escherichia coli E24377A, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009800:43322294332229435609923871Escherichia coli HS, complete genome4e-0867.9BLASTN svgBLASTP svg
CU928160:43951564395156441536720212Escherichia coli IAI1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
AP010958:50221965022196504082118626Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-0867.9BLASTN svgBLASTP svg
CP002185:45661504566150459009923950Escherichia coli W, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014841:13130813130815514123834Pantoea sp. At-9b plasmid pPAT9B04, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_008313:19910001991000200925118252Ralstonia eutropha H16 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_007348:75269275269277745124760Ralstonia eutropha JMP134 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_007337:10464104643241121948Ralstonia eutropha JMP134 plasmid 1, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_007613:41568414156841418149124651Shigella boydii Sb227, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007384:45300004530000455031620317Shigella sonnei Ss046, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012791:40790624079062410253023469Variovorax paradoxus S110 chromosome 1, complete genome8e-25123BLASTN svgBLASTP svg
NC_007086:24770402477040251517738138Xanthomonas campestris pv. campestris str. 8004, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003902:2469500*2469500250580636307Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-1281.8BLASTN svgBLASTP svg
NC_007507:10188710188712419922313Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,5e-1487.7BLASTN svgBLASTP svg
NC_007508:27569452756945277931722373Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome7e-53216BLASTN svgBLASTP svg