Pre_GI: BLASTP Hits

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Query: NC_008544:818730:831332 Burkholderia cenocepacia HI2424 chromosome 3, complete sequence

Start: 831332, End: 833011, Length: 1680

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008060:1346581:1350978135097813525011524Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase0892
NC_009254:745706:7473067473067489971692Burkholderia vietnamiensis G4 chromosome 3, complete sequencephage integrase family protein2e-169596
NC_007434:2290934:2293652229365222953311680Burkholderia pseudomallei 1710b chromosome I, complete sequencephage integrase family protein6e-168590
NC_008543:2666846:2676028267602826777251698Burkholderia cenocepacia HI2424 chromosome 2, complete sequencephage integrase family protein5e-165581
NC_008061:2582000:2589264258926425909611698Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencephage integrase2e-164579
NC_009254:637952:6588356588356605261692Burkholderia vietnamiensis G4 chromosome 3, complete sequencephage integrase family protein4e-161568
NC_007337:10464:1046410464121551692Ralstonia eutropha JMP134 plasmid 1, complete sequencephage integrase4e-161568
NC_010682:1913941:1915633191563319173331701Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein3e-160565
NC_015137:2582467:2587301258730125890131713Burkholderia sp. CCGE1001 chromosome 2, complete sequencehypothetical protein8e-159560
NC_010515:1678487:1720173172017317218641692Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceintegrase family protein2e-158559
NC_014118:987889:1035939103593910376931755Burkholderia sp. CCGE1002 chromosome chromosome 2, completeintegrase family protein1e-148526
NC_010512:1015557:1029161102916110309031743Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceintegrase family protein3e-138492
NC_007510:1959883:2009443200944320112091767Burkholderia sp. 383 chromosome 1, complete sequencePhage integrase9e-137487
NC_014394:942015:9603699603699623631995Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein6e-53209
NC_010682:1593108:1597420159742015995342115Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein2e-50201
NC_015383:368500:3828523828523840241173Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceintegrase family protein2e-32140
NC_008757:111292:1240721240721259461875Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completephage integrase family protein6e-31135
NC_016616:2768053:2776311277631127774891179Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase XerD9e-31135
NC_016626:1825845:1859727185972718609681242Burkholderia sp. YI23 plasmid byi_1p, complete sequenceintegrase family protein1e-29131
NC_011662:2402408:2409839240983924110231185Thauera sp. MZ1T, complete genomeintegrase family protein8e-29129
NC_012723:71637:9549495494973351842Burkholderia glumae BGR1 plasmid bglu_1p, complete sequencePhage integrase family protein6e-27122
NC_012718:27089:2708927089287831695Burkholderia glumae BGR1 plasmid bglu_2p, complete sequencePhage integrase family protein1e-26121
NC_010801:421906:4249834249834261251143Burkholderia multivorans ATCC 17616 chromosome 3, completetyrosine recombinase3e-26120
NC_012720:114489:1336191336191354541836Burkholderia glumae BGR1 plasmid bglu_3p, complete sequencePhage integrase family protein5e-26119
NC_010678:642769:6427696427696439621194Ralstonia pickettii 12J chromosome 2, complete sequenceintegrase family protein8e-26119
NC_015382:266000:2684922684922703271836Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequencePhage integrase family protein3e-25117
NC_013193:38918:4192241922431151194Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmidhypothetical protein2e-24114
NC_016002:2453919:2459603245960324607061104Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein6e-22106
NC_016626:1751159:1768345176834517702941950Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative integrase2e-1997.8
NC_014540:2933853:2935532293553229367011170Burkholderia sp. CCGE1003 chromosome 2, complete sequenceintegrase family protein3e-1894
NC_004578:3193490:3213297321329732146311335Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family1e-1688.6
NC_017986:5833819:5841338584133858426571320Pseudomonas putida ND6 chromosome, complete genomesite-specific recombinase, phage integrase family1e-1688.2
NC_004578:3193490:3209245320924532105491305Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family4e-1686.7
NC_020829:2754203:2762736276273627639051170Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase, phage integrase family protein2e-1584.7
NC_010801:550270:5524335524335539051473Burkholderia multivorans ATCC 17616 chromosome 3, completetyrosine recombinase5e-1583.2
NC_014335:3589726:359683735968373597736900Bacillus cereus biovar anthracis str. CI chromosome, completetyrosine recombinase2e-1378.2
NC_005957:3665657:366765636676563668555900Bacillus thuringiensis serovar konkukian str. 97-27, completetyrosine recombinase2e-1378.2
NC_011658:3603009:363402836340283634927900Bacillus cereus AH187 chromosome, complete genomesite-specific tyrosine recombinase XerC2e-1378.2
NC_011969:3575988:357798735779873578886900Bacillus cereus Q1 chromosome, complete genomesite-specific tyrosine recombinase xerc2e-1377.8
NC_014171:3726054:372995937299593730858900Bacillus thuringiensis BMB171 chromosome, complete genomesite-specific tyrosine recombinase2e-1377.8
NC_003909:3606177:362138136213813622280900Bacillus cereus ATCC 10987, complete genometyrosine recombinase3e-1377.4
NC_007530:3616828:364611036461103647009900Bacillus anthracis str. 'Ames Ancestor', complete genometyrosine recombinase3e-1377.4
NC_005945:3636321:364667836466783647577900Bacillus anthracis str. Sterne, complete genometyrosine recombinase3e-1377.4
NC_003997:3617000:364598336459833646882900Bacillus anthracis str. Ames, complete genometyrosine recombinase3e-1377.4
NC_012659:3617000:364601036460103646909900Bacillus anthracis str. A0248, complete genomesite-specific tyrosine recombinase XerC3e-1377.4
NC_017208:3816753:384609438460943846993900Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesite-specific tyrosine recombinase XerC4e-1377
NC_009256:1782000:1783025178302517845061482Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase family protein5e-1376.6
NC_009254:637952:6512376512376527181482Burkholderia vietnamiensis G4 chromosome 3, complete sequencephage integrase family protein5e-1376.6
NC_008536:435221:442656442656443567912Solibacter usitatus Ellin6076, complete genomephage integrase family protein1e-1275.5
NC_013009:122000:127127127127128032906Neorickettsia risticii str. Illinois, complete genometyrosine recombinase XerD2e-1274.3
NC_007798:112840:115865115865116782918Neorickettsia sennetsu str. Miyayama, complete genometyrosine recombinase XerD3e-1273.9
NC_015589:3085442:310467231046723105562891Desulfotomaculum ruminis DSM 2154 chromosome, complete genometyrosine recombinase XerD7e-1272.8
NC_013939:1812259:181857918185791819487909Deferribacter desulfuricans SSM1, complete genometyrosine recombinase1e-1171.6
NC_017507:155938:1655101655101668141305Marinobacter adhaerens HP15 plasmid pHP-187, complete sequencephage integrase family protein3e-1170.5
NC_012581:559182:591678591678592577900Bacillus anthracis str. CDC 684 chromosome, complete genomesite-specific tyrosine recombinase XerC7e-1169.3
NC_014314:576465:658834658834659820987Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeintegrase family protein7e-1169.3
NC_015167:569569:590349590349591239891Cellulophaga lytica DSM 7489 chromosome, complete genomeTyrosine recombinase xerC1e-1068.6
NC_011297:1296968:129945012994501300340891Dictyoglomus thermophilum H-6-12, complete genometyrosine recombinase XerD3e-1067.4
NC_017986:5797044:5807491580749158086001110Pseudomonas putida ND6 chromosome, complete genomeintegrase/recombinase2e-1067.4
NC_009348:2125698:2153762215376221550391278Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase6e-1066.2
NC_009454:1246393:124639312463931247280888Pelotomaculum thermopropionicum SI, complete genomesite-specific recombinase XerD1e-0965.1
NC_010087:376918:438251438251439075825Burkholderia multivorans ATCC 17616 chromosome 3, completeintegrase family protein2e-0964.7
NC_014329:1407880:143528714352871436168882Corynebacterium pseudotuberculosis FRC41 chromosome, completetyrosine recombinase2e-0964.3
NC_016781:1408235:143522514352251436106882Corynebacterium pseudotuberculosis 3/99-5 chromosome, completetyrosine recombinase XerC2e-0964.3
NC_017031:1420738:143508914350891435970882Corynebacterium pseudotuberculosis P54B96 chromosome, completetyrosine recombinase XerC2e-0964.3
NC_017300:1426975:143264414326441433525882Corynebacterium pseudotuberculosis 1002 chromosome, completetyrosine recombinase XerC2e-0964.3
NC_017301:1425293:143503214350321435913882Corynebacterium pseudotuberculosis C231 chromosome, completetyrosine recombinase XerC2e-0964.3
NC_017303:1420758:143511014351101435991882Corynebacterium pseudotuberculosis I19 chromosome, complete genometyrosine recombinase XerC2e-0964.3
NC_016932:1414226:141989314198931420795903Corynebacterium pseudotuberculosis 316 chromosome, complete genometyrosine recombinase XerC3e-0963.9
NC_012225:345704:350763350763351692930Brachyspira hyodysenteriae WA1, complete genometyrosine recombinase XerD4e-0963.5
NC_007482:607365:6205506205506217611212Pseudoalteromonas haloplanktis TAC125 chromosome II, completeputative site-specific tyrosine integrase/recombinase; may be used for the termination of replication of chromosome 26e-0963.2
NC_014355:243543:260538260538261491954Candidatus Nitrospira defluvii, complete genometyrosine recombinase xerC5e-0963.2
NC_014216:1197704:122781412278141228806993Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometyrosine recombinase XerC7e-0962.8
NC_015589:3813415:382872038287203829688969Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeintegrase family protein8e-0962.4
NC_009952:1984955:201625320162532017179927Dinoroseobacter shibae DFL 12, complete genomehypothtical protein3e-0860.5
NC_009253:829913:844973844973845854882Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein4e-0860.5
NC_014121:4299500:433131143313114332207897Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completesite-specific tyrosine recombinase XerD5e-0859.7
NC_014643:1986440:2002341200234120034111071Rothia dentocariosa ATCC 17931 chromosome, complete genometyrosine recombinase XerC1e-0758.5
NC_010163:1193237:121498912149891215909921Acholeplasma laidlawii PG-8A chromosome, complete genomeintegrase/recombinase, XerD-like protein2e-0757.8
NC_010278:1989500:1989861198986119908711011Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,site-specific tyrosine recombinase XerC3e-0757.4
NC_007348:2115152:2115152211515221167351584Ralstonia eutropha JMP134 chromosome 2, complete sequenceputative integrase/recombinase protein3e-0757.4
NC_009697:2558286:258221725822172583062846Clostridium botulinum A str. ATCC 19397 chromosome, completephage integrase family site specific recombinase3e-0757.4
NC_015851:10915:341803418035112933Acidithiobacillus caldus SM-1 megaplasmid, complete sequencetyrosine recombinase, phage integrase family3e-0757.4
NC_009053:2025782:2028258202825820292681011Actinobacillus pleuropneumoniae L20, complete genomeTyrosine recombinase xerC4e-0757
NC_010939:2085000:208550420855042086424921Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTyrosine recombinase xerC4e-0757
NC_016612:477407:507534507534508430897Klebsiella oxytoca KCTC 1686 chromosome, complete genomesite-specific tyrosine recombinase XerD4e-0757
NC_012846:2299282:230110723011072302045939Bartonella grahamii as4aup, complete genomeintegrase /recombinase xerD4e-0757
NC_016818:859181:859181859181860140960Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetyrosine recombinase XerD4e-0756.6
NC_016641:1369424:137467413746741375636963Paenibacillus terrae HPL-003 chromosome, complete genomeintegrase5e-0756.6
NC_014394:1554373:155944615594461560342897Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein7e-0756.2
NC_013169:1545890:156312515631251564075951Kytococcus sedentarius DSM 20547, complete genometyrosine recombinase XerD subunit7e-0756.2
NC_020064:3825916:384373738437373844636900Serratia marcescens FGI94, complete genometyrosine recombinase XerD8e-0755.8
NC_007947:2447635:248601824860182486851834Methylobacillus flagellatus KT, complete genomeTyrosine recombinase XerD8e-0755.8
NC_010510:388885:401104401104402021918Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein1e-0655.5
NC_016629:3308329:333954633395463340514969Desulfovibrio africanus str. Walvis Bay chromosome, completeTyrosine recombinase xerC1e-0655.5
NC_009348:1064664:106375610637561064667912Aeromonas salmonicida subsp. salmonicida A449, complete genomesite-specific integrase/recombinase1e-0655.1
NC_007712:4023516:402260840226084023519912Sodalis glossinidius str. 'morsitans', complete genomephage integrase1e-0655.1
NC_016622:82418:897908979090788999Azospirillum lipoferum 4B, complete genomeputative Phage integrase2e-0655.1
NC_014376:3593500:3603669360366936046881020Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein2e-0654.7
NC_010623:1961685:1976580197658019775901011Burkholderia phymatum STM815 chromosome 2, complete sequenceintegrase family protein2e-0654.7
NC_007645:1785000:179918717991871800041855Hahella chejuensis KCTC 2396, complete genometyrosine recombinase XerD2e-0654.7
NC_012779:3176820:322735132273513228250900Edwardsiella ictaluri 93-146, complete genometyrosine recombinase XerD, putative4e-0653.5
NC_007677:1872459:187537918753791876314936Salinibacter ruber DSM 13855, complete genometyrosine recombinase xerC4e-0653.5
NC_013209:1969734:198503619850361985983948Acetobacter pasteurianus IFO 3283-01, complete genomephage DNA recombinase RipX/XerC4e-0653.5
NC_017100:1972389:198769119876911988638948Acetobacter pasteurianus IFO 3283-03, complete genomephage DNA recombinase RipX/XerC4e-0653.5
NC_017108:1969716:198501819850181985965948Acetobacter pasteurianus IFO 3283-12, complete genomephage DNA recombinase RipX/XerC4e-0653.5
NC_017111:1969704:198500619850061985953948Acetobacter pasteurianus IFO 3283-32, complete genomephage DNA recombinase RipX/XerC4e-0653.5
NC_017121:1969716:198501819850181985965948Acetobacter pasteurianus IFO 3283-07, complete genomephage DNA recombinase RipX/XerC4e-0653.5
NC_017125:1972384:198768619876861988633948Acetobacter pasteurianus IFO 3283-22, complete genomephage DNA recombinase RipX/XerC4e-0653.5
NC_017146:1972396:198769819876981988645948Acetobacter pasteurianus IFO 3283-26, complete genomephage DNA recombinase RipX/XerC4e-0653.5
NC_017150:1877480:189278218927821893729948Acetobacter pasteurianus IFO 3283-01-42C, complete genomephage DNA recombinase RipX/XerC4e-0653.5
NC_017186:5184000:519203051920305193010981Amycolatopsis mediterranei S699 chromosome, complete genomephage integrase family protein6e-0653.1
NC_014318:5183975:519199651919965192976981Amycolatopsis mediterranei U32 chromosome, complete genomephage integrase family protein6e-0653.1
NC_009142:2480608:248410224841022485091990Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase/recombinase6e-0653.1
NC_012968:2228943:225078322507832251691909Methylotenera mobilis JLW8, complete genometyrosine recombinase XerD9e-0652.4