Pre_GI: BLASTN Hits

Some Help

Query: NC_008543:323773 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 323773, End: 347099, Length: 23327

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010552:21310212131021214958218562Burkholderia ambifaria MC40-6 chromosome 2, complete sequence03955BLASTN svgBLASTP svg
NC_010645:3720501*3720501374549924999Bordetella avium 197N, complete genome0765BLASTN svgBLASTP svg
NC_014924:29619702961970298516923200Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome3e-77297BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome5e-60240BLASTN svgBLASTP svg
NC_015563:5162177*5162177518611723941Delftia sp. Cs1-4 chromosome, complete genome1e-57232BLASTN svgBLASTP svg
NC_014931:49855004985500500477719278Variovorax paradoxus EPS chromosome, complete genome2e-53218BLASTN svgBLASTP svg
NC_010002:2293670*2293670231767724008Delftia acidovorans SPH-1, complete genome8e-53216BLASTN svgBLASTP svg
NC_010338:4015928*4015928404982733900Caulobacter sp. K31, complete genome1e-48202BLASTN svgBLASTP svg
NC_015563:31328331328333492521643Delftia sp. Cs1-4 chromosome, complete genome3e-43184BLASTN svgBLASTP svg
NC_002696:2829002*2829002285565626655Caulobacter crescentus CB15, complete genome7e-41176BLASTN svgBLASTP svg
NC_013446:41828784182878420121918342Comamonas testosteroni CNB-2, complete genome7e-41176BLASTN svgBLASTP svg
NC_014100:1144463*1144463117100626544Caulobacter segnis ATCC 21756 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_014118:2316000*2316000234104325044Burkholderia sp. CCGE1002 chromosome chromosome 2, complete5e-23117BLASTN svgBLASTP svg
NC_014623:10036628*100366281006030023673Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_008313:19565001956500197559919100Ralstonia eutropha H16 chromosome 1, complete sequence2e-22115BLASTN svgBLASTP svg
NC_013446:35205003520500354200621507Comamonas testosteroni CNB-2, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_004337:25482882548288256963421347Shigella flexneri 2a str. 301, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_004741:25264212526421254776721347Shigella flexneri 2a str. 2457T, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008258:25428632542863256544822586Shigella flexneri 5 str. 8401, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009439:574437*57443759753523099Pseudomonas mendocina ymp, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012880:37486653748665378917040506Dickeya dadantii Ech703, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015410:61702061702063960722588Pseudomonas mendocina NK-01 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015740:636667*63666765977523109Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007435:191821*19182122269530875Burkholderia pseudomallei 1710b chromosome II, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_014365:2359760*2359760238225722498Desulfarculus baarsii DSM 2075 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013169:1058463*1058463108536926907Kytococcus sedentarius DSM 20547, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012029:1525929*1525929155430628378Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007519:1244198*1244198126883324636Desulfovibrio alaskensis G20 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006155:32379903237990326294924960Yersinia pseudotuberculosis IP 32953, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014729:800892*80089282341022519Halogeometricum borinquense DSM 11551 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012721:24000024000026711727118Burkholderia glumae BGR1 chromosome 2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015656:16534501653450168062227173Frankia symbiont of Datisca glomerata chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008044:3024125*3024125304909924975Silicibacter sp. TM1040, complete genome3e-0661.9BLASTN svgBLASTP svg