Pre_GI: BLASTP Hits

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Query: NC_008543:90312:108525 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 108525, End: 109079, Length: 555

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008061:2153495:216069421606942161248555Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceOsmC-like protein1e-105381
NC_008545:115292:128484128484129038555Burkholderia cenocepacia HI2424 plasmid 1, complete sequenceOsmC family protein2e-104377
NC_010552:335989:344329344329344883555Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceOsmC family protein2e-102370
NC_010515:1375091:140588714058871406441555Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceOsmC family protein2e-102370
NC_008390:2156188:217563921756392176199561Burkholderia cepacia AMMD chromosome 1, complete sequenceOsmC family protein8e-82302
NC_004578:4781326:480325648032564803810555Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-79294
NC_013743:1045488:106089210608921061512621Haloterrigena turkmenica DSM 5511, complete genomeOsmC family protein2e-32138
NC_014831:2082304:210308221030822103618537Thermaerobacter marianensis DSM 12885 chromosome, complete genomeOsmC family protein3e-28124
NC_014974:1076565:110484711048471105407561Thermus scotoductus SA-01 chromosome, complete genomeOsmC family protein1e-27122
UCMB5137:2054735:209557320955732096097525Bacillus atrophaeus UCMB-5137unknown3e-24111
NC_019673:6473743:647327364732736473788516Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-2097.4
NC_012522:7871173:787692578769257877497573Rhodococcus opacus B4, complete genomehypothetical protein6e-2097.1
NC_015850:548821:563327563327563671345Acidithiobacillus caldus SM-1 chromosome, complete genomeOsmC family protein4e-1890.9
NC_015850:1947000:195229419522941952638345Acidithiobacillus caldus SM-1 chromosome, complete genomeOsmC family protein4e-1890.9
UCMB5137:2054735:210050621005062101021516Bacillus atrophaeus UCMB-5137unknown2e-1788.2
NC_012522:7837071:784813178481317848691561Rhodococcus opacus B4, complete genomehypothetical protein8e-1786.7
NC_008269:868000:879771879771880301531Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencehypothetical protein3e-1581.6
NC_008269:868000:907771907771908301531Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencehypothetical protein3e-1581.6
NC_011295:1218792:122854212285421228982441Coprothermobacter proteolyticus DSM 5265, complete genomeconserved protein with OsmC domain1e-1479.3
NC_013889:1740858:176443017644301765011582Thioalkalivibrio sp. K90mix chromosome, complete genomeOsmC family protein3e-1374.7
NC_012791:2233098:224276522427652243322558Variovorax paradoxus S110 chromosome 1, complete genomeOsmC family protein7e-1373.6
NC_017221:495088:508136508136508567432Bifidobacterium longum subsp. longum KACC 91563 chromosome,OsmC family protein1e-1169.7
NC_014222:1677610:168557616855761686025450Methanococcus voltae A3 chromosome, complete genomeOsmC family protein2e-0755.5
NC_013406:3874157:389194338919433892494552Paenibacillus sp. Y412MC10 chromosome, complete genomeOsmC family protein2e-0755.5