Pre_GI: BLASTP Hits

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Query: NC_008543:2220698:2229467 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 2229467, End: 2229790, Length: 324

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010170:4800000:489749048974904897813324Bordetella petrii, complete genomeHTH-type transcriptional regulator2e-32137
NC_004757:2730057:277686827768682777188321Nitrosomonas europaea ATCC 19718, complete genomeHelix-turn-helix motif2e-21101
NC_014540:2933853:295871529587152959032318Burkholderia sp. CCGE1003 chromosome 2, complete sequencehelix-turn-helix domain-containing protein3e-21100
NC_011000:1216430:123284312328431233166324Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein3e-21100
NC_009076:75535:873628736287685324Burkholderia pseudomallei 1106a chromosome I, complete sequencetranscriptional regulator, XRE family6e-2199.4
NC_007645:6407370:641820964182096418529321Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator9e-2095.5
NC_010995:1417329:141941314194131419736324Cellvibrio japonicus Ueda107, complete genomeHelix-turn-helix motif7e-1992.4
NC_008825:2525380:254043925404392540762324Methylibium petroleiphilum PM1, complete genomehelix-turn-helix protein8e-1785.9
NC_008254:611437:611437611437611757321Mesorhizobium sp. BNC1, complete genometranscriptional regulator, XRE family1e-1685.1
NC_012811:410776:421061421061421381321Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative transcriptional regulator2e-1684.3
NC_007645:5724000:574088657408865741206321Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator3e-1684
NC_009256:3601080:361300036130003613326327Burkholderia vietnamiensis G4 chromosome 1, complete sequenceXRE family transcriptional regulator1e-1478.2
NC_007645:5801295:580985358098535810188336Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator3e-1477
NC_008380:2287327:230295523029552303281327Rhizobium leguminosarum bv. viciae 3841, complete genomeputative helix-turn-helix transcriptional regulatory protein1e-1375.5
NC_013194:4405764:441480444148044415130327Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetranscriptional regulator, XRE family7e-1372.4
NC_014910:465980:495325495325495654330Alicycliphilus denitrificans BC chromosome, complete genomehelix-turn-helix domain protein5e-1063.2
NC_013939:1535071:155165715516571552193537Deferribacter desulfuricans SSM1, complete genomeXRE family transcriptional regulator3e-0650.8