Pre_GI: BLASTP Hits

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Query: NC_008543:127675:148123 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 148123, End: 148770, Length: 648

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015850:1220444:122563512256351226216582Acidithiobacillus caldus SM-1 chromosome, complete genomeIV secretion complex assembly protein6e-1890.9
NC_015850:169180:171572171572172081510Acidithiobacillus caldus SM-1 chromosome, complete genomeVirB11e-0859.7
NC_015942:1920693:192647019264701927042573Acidithiobacillus ferrivorans SS3 chromosome, complete genomelytic transglycosylase2e-1789
NC_016513:54802:598975989760610714Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeLytic transglycosyllase catalytic2e-23109
NC_011985:3869998:387486138748613875529669Agrobacterium radiobacter K84 chromosome 1, complete genometype IV secretion protein AvhB12e-1169.3
NC_010170:3908500:391497339149733915638666Bordetella petrii, complete genometype IV secretion system protein VirB14e-27121
NC_008061:2106848:212099921209992121646648Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceLytic transglycosylase, catalytic6e-111399
NC_011001:372185:379651379651380298648Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB19e-100362
NC_010515:1124298:113845111384511139098648Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceLytic transglycosylase catalytic1e-101369
NC_010676:2793237:279644827964482797095648Burkholderia phytofirmans PsJN chromosome 2, complete sequenceLytic transglycosylase catalytic5e-48190
NC_015947:2752450:276677027667702767753984Burkholderia sp. JV3 chromosome, complete genomelytic transglycosylase8e-27120
NC_009792:859228:884053884053884763711Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-21100
NC_013716:4306695:438339243833924384003612Citrobacter rodentium ICC168, complete genome5e-36150
NC_014500:3097362:314698231469823147668687Dickeya dadantii 3937 chromosome, complete genomeVirB11e-1996.3
NC_013592:2968500:299751929975192998226708Dickeya dadantii Ech586, complete genomeLytic transglycosylase catalytic8e-24110
NC_012912:1701231:170809317080931708740648Dickeya zeae Ech1591, complete genomeLytic transglycosylase catalytic4e-22104
NC_020181:473170:497996497996498706711Enterobacter aerogenes EA1509E, complete genomeBores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1)5e-21100
NC_004547:1873390:187717918771791877826648Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative conjugal transfer protein1e-21102
NC_013422:1732677:174860017486001749133534Halothiobacillus neapolitanus c2, complete genomeLytic transglycosylase catalytic8e-26117
NC_011283:1811000:185097218509721851616645Klebsiella pneumoniae 342 chromosome, complete genometransglycosylase SLT domain-containing protein1e-20100
NC_012731:3411161:344922534492253449935711Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretory pathway VirB1 component6e-21100
NC_016845:3448881:346834034683403469050711Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative type IV secretory pathway VirB1 component6e-21100
NC_010524:933191:937794937794938303510Leptothrix cholodnii SP-6, complete genomeLytic transglycosylase catalytic6e-33140
NC_019973:5694620:571107757110775711850774Mesorhizobium australicum WSM2073, complete genometransglycosylase family protein6e-1477.4
NC_014923:5765660:578211757821175782890774Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeLytic transglycosylase catalytic6e-1477.4
NC_015675:6276357:633678863367886337561774Mesorhizobium opportunistum WSM2075 chromosome, complete genomelytic transglycosylase catalytic subunit6e-1477.4
NC_012440:1841315:186590018659001866409510Persephonella marina EX-H1, complete genomesoluble lytic murein transglycosylase8e-0857.4
NC_006371:1743982:176848617684861769013528Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical conjugal transfer protein7e-1994
NC_008781:2611702:263095426309542631538585Polaromonas naphthalenivorans CJ2, complete genomeLytic transglycosylase, catalytic5e-1167.8
NC_007275:1:200772007720790714Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeconjugal transfer protein2e-28125
NC_016818:1795576:183300218330021833649648Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetransglycosylase5e-23107
NC_017047:2079368:208240520824052083052648Rahnella aquatilis HX2 chromosome, complete genometransglycosylase4e-23107
NC_011092:76993:888358883589497663Salmonella enterica subsp. enterica serovar Schwarzengrund strtype IV secretory pathway VirB1 component2e-23109
NC_010943:3034366:304672530467253047690966Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretion system conjugal protein2e-26119
NC_011071:2733438:274841727484172749400984Stenotrophomonas maltophilia R551-3, complete genomeLytic transglycosylase catalytic3e-27121
NC_012438:818387:822964822964823485522Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeHpa22e-0962.4
NC_014914:127873:130277130277131008732Taylorella equigenitalis MCE9 chromosome, complete genomePeptidoglycan hydrolase VirB18e-38156
NC_013722:2150882:216041421604142161301888Xanthomonas albilineans, complete genomeputative virb1 protein7e-24110
NC_003919:3060484:308245230824523083294843Xanthomonas axonopodis pv. citri str. 306, complete genomeVirB1 protein5e-26117
NC_007086:1936505:196269619626961963529834Xanthomonas campestris pv. campestris str. 8004, complete genomeVirB1 protein2e-25115
NC_003902:2933121:294669029466902947523834Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirB1 protein2e-25115
NC_010688:1908012:193542719354271936266840Xanthomonas campestris pv. campestris, complete genometype IV secretion system lytic murein transglycosylase component VirB14e-26118
NC_017271:2935643:296739329673932968319927Xanthomonas campestris pv. raphani 756C chromosome, completeVirB1 protein5e-28124