Pre_GI: BLASTN Hits

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Query: NC_008542:483761 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 483761, End: 514699, Length: 30939

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008060:2913671*2913671294708933419Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence028860BLASTN svgBLASTP svg
NC_010508:451184*45118447649825315Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence013940BLASTN svgBLASTP svg
NC_010551:41548741548744051025024Burkholderia ambifaria MC40-6 chromosome 1, complete sequence02698BLASTN svgBLASTP svg
NC_008390:40731540731543675629442Burkholderia cepacia AMMD chromosome 1, complete sequence02613BLASTN svgBLASTP svg
NC_007510:40984340984345009940257Burkholderia sp. 383 chromosome 1, complete sequence02484BLASTN svgBLASTP svg
NC_006350:3710641*3710641373649425854Burkholderia pseudomallei K96243 chromosome 1, complete sequence02413BLASTN svgBLASTP svg
NC_009074:3559211*3559211358478825578Burkholderia pseudomallei 668 chromosome I, complete sequence02405BLASTN svgBLASTP svg
NC_012724:359444*35944438978130338Burkholderia glumae BGR1 chromosome 1, complete genome02105BLASTN svgBLASTP svg
NC_010804:52000*520007319121192Burkholderia multivorans ATCC 17616 chromosome 1, complete01061BLASTN svgBLASTP svg
NC_010682:3313944*3313944336341949476Ralstonia pickettii 12J chromosome 1, complete sequence3e-179636BLASTN svgBLASTP svg
NC_012856:3000839*3000839302487724039Ralstonia pickettii 12D chromosome 1, complete genome2e-168601BLASTN svgBLASTP svg
NC_014323:4619344*4619344465241733074Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-148533BLASTN svgBLASTP svg
NC_010002:61045006104500613350729008Delftia acidovorans SPH-1, complete genome1e-141511BLASTN svgBLASTP svg
NC_015563:12409781240978126477223795Delftia sp. Cs1-4 chromosome, complete genome4e-132480BLASTN svgBLASTP svg
NC_015856:764651*76465179679232142Collimonas fungivorans Ter331 chromosome, complete genome2e-128468BLASTN svgBLASTP svg
NC_011992:77390577390579750923605Acidovorax ebreus TPSY, complete genome2e-125458BLASTN svgBLASTP svg
NC_010804:32439632439635325628861Burkholderia multivorans ATCC 17616 chromosome 1, complete9e-112412BLASTN svgBLASTP svg
NC_007651:17264721726472175232825857Burkholderia thailandensis E264 chromosome I, complete sequence2e-54222BLASTN svgBLASTP svg
NC_007510:943068*94306896450321436Burkholderia sp. 383 chromosome 1, complete sequence1e-49206BLASTN svgBLASTP svg
NC_015138:11430151143015116543022416Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete6e-42180BLASTN svgBLASTP svg
NC_009434:1156834*1156834117518418351Pseudomonas stutzeri A1501, complete genome5e-36161BLASTN svgBLASTP svg
NC_015422:3513689*3513689356513551447Alicycliphilus denitrificans K601 chromosome, complete genome8e-35157BLASTN svgBLASTP svg
NC_015422:34933963493396351574822353Alicycliphilus denitrificans K601 chromosome, complete genome8e-35157BLASTN svgBLASTP svg
NC_012721:770651*77065183681366163Burkholderia glumae BGR1 chromosome 2, complete genome2e-29139BLASTN svgBLASTP svg
NC_015740:1017000*1017000104061723618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-29137BLASTN svgBLASTP svg
NC_012560:1260031*1260031129243132401Azotobacter vinelandii DJ, complete genome3e-25125BLASTN svgBLASTP svg
NC_021150:1258780*1258780127736818589Azotobacter vinelandii CA6, complete genome3e-25125BLASTN svgBLASTP svg
NC_015376:11850001185000120456219563Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-23119BLASTN svgBLASTP svg
NC_010505:1581429*1581429160710125673Methylobacterium radiotolerans JCM 2831, complete genome4e-21111BLASTN svgBLASTP svg
NC_013722:31174423117442314053923098Xanthomonas albilineans, complete genome3e-19105BLASTN svgBLASTP svg
NC_018644:910000*91000093169821699Alpha proteobacterium HIMB59 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_010645:36940836940840678237375Bordetella avium 197N, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015376:17528831752883177658023698Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-1489.7BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete4e-1281.8BLASTN svgBLASTP svg
NC_010801:48160148160150140619806Burkholderia multivorans ATCC 17616 chromosome 3, complete4e-1281.8BLASTN svgBLASTP svg
NC_008391:69922269922271789818677Burkholderia cepacia AMMD chromosome 2, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_011567:388358*38835841678028423Anoxybacillus flavithermus WK1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011567:2327870*2327870234959921730Anoxybacillus flavithermus WK1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011567:139598*13959816123721640Anoxybacillus flavithermus WK1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015379:6226661*6226661626523538575Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-1177.8BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_012724:17815541781554180509923546Burkholderia glumae BGR1 chromosome 1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010557:1030319*1030319105573625418Burkholderia ambifaria MC40-6 chromosome 3, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_014220:2265882*2265882228598020099Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007645:6013242*6013242603721023969Hahella chejuensis KCTC 2396, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007963:2512478*2512478253370821231Chromohalobacter salexigens DSM 3043, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007759:291368*29136832274831381Syntrophus aciditrophicus SB, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013716:4824541*4824541484830623766Citrobacter rodentium ICC168, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_002927:506183*50618356896162779Bordetella bronchiseptica RB50, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008061:18642821864282188910424823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008543:58212958212961104528917Burkholderia cenocepacia HI2424 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010551:14121391412139143594323805Burkholderia ambifaria MC40-6 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_011901:3072817*3072817309809925283Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_012725:976819768112016422484Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_015377:34445344455962225178Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_018721:2759700*2759700278187922180Psychroflexus torquis ATCC 700755 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_006138:1245944*1245944128539239449Desulfotalea psychrophila LSv54, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008278:81866*8186610216620301Frankia alni ACN14a, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009720:3281000*3281000330704926050Xanthobacter autotrophicus Py2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010681:111969219692Burkholderia phytofirmans PsJN chromosome 1, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_012721:16864501686450170480118352Burkholderia glumae BGR1 chromosome 2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013216:293571*29357131635022780Desulfotomaculum acetoxidans DSM 771, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014958:1335650*1335650135803722388Deinococcus maricopensis DSM 21211 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015572:4209000*4209000424633837339Methylomonas methanica MC09 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003888:4377000*4377000439557918580Streptomyces coelicolor A3(2), complete genome4e-0661.9BLASTN svgBLASTP svg