Pre_GI: BLASTP Hits

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Query: NC_008530:646207:656005 Lactobacillus gasseri ATCC 33323, complete genome

Start: 656005, End: 656526, Length: 522

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014554:2159782:216735321673532167880528Lactobacillus plantarum subsp. plantarum ST-III chromosome,terminase small subunit3e-33140
NC_008526:1924761:192873019287301929302573Lactobacillus casei ATCC 334, complete genomePhage terminase, small subunit3e-31134
NC_013198:1095591:112294711229471123480534Lactobacillus rhamnosus GG, complete genomephage protein, terminase small subunit2e-30131
NC_009004:2207148:221295722129572213397441Lactococcus lactis subsp. cremoris MG1363, complete genomeputative Terminase small subunit1e-29129
NC_002662:30922:362713627136714444Lactococcus lactis subsp. lactis Il1403, complete genometerminase subunit1e-29128
NC_008527:2112137:211706521170652117508444Lactococcus lactis subsp. cremoris SK11, complete genomePhage terminase, small subunit4e-29127
NC_008261:1099982:110122611012261101693468Clostridium perfringens ATCC 13124, complete genomephage terminase, small subunit1e-27122
NC_011660:2924397:294225129422512942793543Listeria monocytogenes HCC23 chromosome, complete genomePhage terminase, small subunit3e-24111
NC_003212:57061:930909309093632543Listeria innocua Clip11262, complete genomehypothetical protein6e-24110
NC_012658:1810640:182776818277681828202435Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage terminase small subunit9e-24109
NC_014136:1879049:189687818968781897393516Leuconostoc kimchii IMSNU11154 chromosome, complete genomeprophage Lp2 protein 342e-22104
NC_013517:1480368:149955014995501499990441Sebaldella termitidis ATCC 33386, complete genomeTerminase small subunit3e-22104
NC_006582:2944237:297283729728372973274438Bacillus clausii KSM-K16, complete genometerminase small subunit G1p2e-21101
NC_009674:2985878:300791230079123008343432Bacillus cytotoxicus NVH 391-98 chromosome, complete genometerminase small subunit3e-21101
NC_014633:99744:123117123117123557441Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceterminase small subunit5e-21100
NC_012471:2080902:208922120892212089673453Streptococcus equi subsp. equi 4047, complete genomephage terminase, small subunit6e-2097.1
NC_004606:446427:461064461064461516453Streptococcus pyogenes SSI-1, complete genometerminase small subunit (g1p)6e-2097.1
NC_009332:1050353:105457610545761055028453Streptococcus pyogenes str. Manfredo chromosome, complete genomephage terminase small subunit6e-2097.1
NC_006086:35599:501945019450688495Streptococcus pyogenes MGAS10394, complete genomePhage Terminase Small Subunit6e-2097.1
NC_008023:1426687:142795414279541428448495Streptococcus pyogenes MGAS2096, complete genomephage terminase small subunit6e-2096.7
NC_007297:1406796:140961114096111410105495Streptococcus pyogenes MGAS5005, complete genomephage terminase small subunit6e-2096.7
NC_008021:1401249:140406414040641404558495Streptococcus pyogenes MGAS9429, complete genomephage terminase small subunit6e-2096.7
NC_004070:1431146:143536914353691435800432Streptococcus pyogenes MGAS315, complete genomeputative terminase small subunit - phage associated6e-2096.7
NC_015425:1295261:130928913092891309750462Clostridium botulinum BKT015925 chromosome, complete genomephage terminase family protein2e-1892
NC_009012:2927793:294521629452162945665450Clostridium thermocellum ATCC 27405, complete genomeTerminase small subunit4e-1890.9
NC_007503:1486000:150487215048721505324453Carboxydothermus hydrogenoformans Z-2901, complete genomeprophage LambdaCh01, terminase, small subunit4e-1890.5
NC_014724:1101950:111529911152991115868570Lactobacillus amylovorus GRL 1112 chromosome, complete genomeprophage Lp2 protein 341e-1789.4
NC_017294:115500:130164130164130586423Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeprophage LambdaCh01, terminase, small subunit9e-1682.8
NC_015913:117966:130854130854131276423Candidatus Arthromitus sp. SFB-mouse-Japan, complete genometerminase small subunit9e-1682.8
NC_011375:749693:764496764496764966471Streptococcus pyogenes NZ131 chromosome, complete genometerminase small subunit1e-1582.4
NC_017294:403422:408206408206408628423Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeprophage LambdaCh01, terminase, small subunit2e-1581.6
NC_014498:1983740:201399920139992014478480Streptococcus pneumoniae 670-6B chromosome, complete genomephage terminase small subunit8e-1579.7
NC_012466:1754388:176855317685531769053501Streptococcus pneumoniae JJA, complete genomephage terminase small subunit1e-1479.3
NC_011898:3567761:359745235974523597964513Clostridium cellulolyticum H10, complete genomeTerminase small subunit3e-1168.2
NC_011898:3824000:384587738458773846389513Clostridium cellulolyticum H10, complete genomeTerminase small subunit3e-1167.8
NC_015516:1467136:149075114907511491260510Melissococcus plutonius ATCC 35311, complete genomephage terminase small subunit4e-1167.4
NC_020134:420500:432110432110432376267Clostridium stercorarium subsp. stercorarium DSM 8532, completeterminase small subunit1e-1065.5
NC_017068:2661419:268244226824422682813372Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage terminase9e-1062.8
NC_020063:2565605:257026725702672570545279Enterobacteriaceae bacterium strain FGI 57, complete genomephage terminase, small subunit2e-0962
NC_013956:1207500:121270112127011212934234Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-0961.2
NC_012967:786534:791455791455792006552Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein8e-0959.7
NC_006138:2288261:228983122898312290409579Desulfotalea psychrophila LSv54, complete genomesimilar to terminase, small subunit2e-0858.5
NC_014925:578759:599843599843600337495Staphylococcus pseudintermedius HKU10-03 chromosome, completePhage terminase, small subunit6e-0857
NC_009699:2552195:255219525521952552782588Clostridium botulinum F str. Langeland chromosome, complete genomephage terminase small subunit1e-0755.8
NC_017297:2531750:255233525523352552922588Clostridium botulinum F str. 230613 chromosome, complete genomeputative phage terminase, small subunit1e-0755.8
NC_017347:2119000:212382921238292124398570Staphylococcus aureus subsp. aureus T0131 chromosome, completeterminase2e-0755.5
NC_009778:2993218:300141130014113001968558Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0755.5
NC_017341:903473:915979915979916548570Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,bacteriophage terminase small subunit2e-0755.1
NC_009782:920272:934955934955935395441Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein3e-0754.7
NC_002758:918827:933511933511933951441Staphylococcus aureus subsp. aureus Mu50, complete genomesmall terminase3e-0754.7
NC_007795:1922000:195004619500461950486441Staphylococcus aureus subsp. aureus NCTC 8325, complete genometerminase small subunit, putative4e-0754.3
NC_009641:1105075:111548911154891115929441Staphylococcus aureus subsp. aureus str. Newman chromosome,phage terminase small subunit4e-0754.3
NC_009641:1979053:200619920061992006639441Staphylococcus aureus subsp. aureus str. Newman chromosome,phage terminase small subunit4e-0754.3
NC_017351:643674:659973659973660413441Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeterminase small subunit4e-0754.3
NC_004557:1141558:115367911536791154602924Clostridium tetani E88, complete genomephage terminase small subunit4e-0754.3
NC_016514:2476359:249393624939362494934999Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein7e-0753.5
NC_011375:1482324:148722114872211487703483Streptococcus pyogenes NZ131 chromosome, complete genomeSmall terminase1e-0652.8
NC_002737:780857:794673794673795155483Streptococcus pyogenes M1 GAS, complete genomeputative terminase, small subunit - phage associated1e-0652.8
NC_008021:779380:793590793590794090501Streptococcus pyogenes MGAS9429, complete genomephage terminase small subunit1e-0652.4
NC_009632:921759:936566936566937135570Staphylococcus aureus subsp. aureus JH1 chromosome, completeterminase small subunit3e-0651.6
UCMB5137:861734:861734861734862534801Bacillus atrophaeus UCMB-5137PBSX defective prophage terminase (small subunit)3e-0651.6
NC_003485:1061344:106973010697301070212483Streptococcus pyogenes MGAS8232, complete genomeputative terminase, small subunit2e-0651.6
NC_009487:921884:936766936766937260495Staphylococcus aureus subsp. aureus JH9 chromosome, completeterminase small subunit3e-0651.2
NC_009656:2422083:244101824410182441617600Pseudomonas aeruginosa PA7 chromosome, complete genometerminase small subunit4e-0651.2
NC_007622:1842000:187082018708201871329510Staphylococcus aureus RF122, complete genomehypothetical mobile-element-associated protein4e-0650.8
NC_009648:1541699:1569749156974915707531005Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-0549.7