Pre_GI: BLASTP Hits

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Query: NC_008530:646207:650806 Lactobacillus gasseri ATCC 33323, complete genome

Start: 650806, End: 651267, Length: 462

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012559:1685812:170054517005451700982438Laribacter hongkongensis HLHK9, complete genomeHolliday junction resolvase7e-1889.4
NC_012781:1968827:198394119839411984390450Eubacterium rectale ATCC 33656, complete genomehypothetical protein4e-1787
NC_009656:2422083:243730524373052437754450Pseudomonas aeruginosa PA7 chromosome, complete genomeendodeoxyribonuclease RusA7e-1476.3
NC_009089:1093832:10873831087383114439857016Clostridium difficile 630, complete genome5e-1270.1
NC_009089:1093832:110837711083771108784408Clostridium difficile 630, complete genomeputative phage endonuclease4e-1167
NC_007794:3218729:322579832257983226205408Novosphingobium aromaticivorans DSM 12444, complete genomeendodeoxyribonuclease RusA1e-1065.5
NC_012658:1810640:182280818228081823209402Clostridium botulinum Ba4 str. 657 chromosome, complete genomeendodeoxyribonuclease RusA family protein2e-0961.2
NC_009495:1821938:183585318358531836254402Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephage protein3e-0960.8
NC_009255:1344000:135923513592351359711477Burkholderia vietnamiensis G4 chromosome 2, complete sequenceendodeoxyribonuclease RusA7e-0856.2
NC_003212:1248000:125776612577661258203438Listeria innocua Clip11262, complete genomehypothetical protein1e-0755.5
NC_011001:1145508:115846611584661158936471Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative phage endodeoxyribonuclease RusA2e-0755.1
NC_009720:4087831:409844140984414098848408Xanthobacter autotrophicus Py2, complete genomeendodeoxyribonuclease RusA3e-0754.3
NC_006270:1415001:143525514352551435677423Bacillus licheniformis ATCC 14580, complete genomephage related protein7e-0649.7
NC_006322:1415863:143611814361181436540423Bacillus licheniformis ATCC 14580, complete genomeYqaN7e-0649.7