Pre_GI: BLASTN Hits

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Query: NC_008526:343445 Lactobacillus casei ATCC 334, complete genome

Start: 343445, End: 367272, Length: 23828

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014334:19543331954333198420029868Lactobacillus casei str. Zhang chromosome, complete genome02631BLASTN svgBLASTP svg
NC_010999:20597382059738208224722510Lactobacillus casei, complete genome02399BLASTN svgBLASTP svg
NC_008526:56590256590259093225031Lactobacillus casei ATCC 334, complete genome02068BLASTN svgBLASTP svg
NC_008526:50626350626352818721925Lactobacillus casei ATCC 334, complete genome02068BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome02068BLASTN svgBLASTP svg
NC_008526:23731902373190239665623467Lactobacillus casei ATCC 334, complete genome02062BLASTN svgBLASTP svg
NC_014334:49330849330851458821281Lactobacillus casei str. Zhang chromosome, complete genome02050BLASTN svgBLASTP svg
NC_014334:36997436997439377323800Lactobacillus casei str. Zhang chromosome, complete genome02046BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome02044BLASTN svgBLASTP svg
NC_010999:21557142155714218202826315Lactobacillus casei, complete genome02020BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome02014BLASTN svgBLASTP svg
NC_010999:34925234925236774518494Lactobacillus casei, complete genome01986BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome01865BLASTN svgBLASTP svg
NC_014727:1485656*1485656150613920484Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,01298BLASTN svgBLASTP svg
NC_018528:18067611806761183455627796Lactobacillus helveticus R0052 chromosome, complete genome5e-159569BLASTN svgBLASTP svg
NC_010999:62348962348964609722609Lactobacillus casei, complete genome5e-48200BLASTN svgBLASTP svg
NC_015603:111261012610Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequence4e-30141BLASTN svgBLASTP svg
NC_008525:56100056100058709926100Pediococcus pentosaceus ATCC 25745, complete genome2e-25125BLASTN svgBLASTP svg
NC_010610:86119486119488392322730Lactobacillus fermentum IFO 3956, complete genome5e-23117BLASTN svgBLASTP svg
NC_014106:24483124483126509920269Lactobacillus crispatus ST1, complete genome2e-22115BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010610:11784301178430122897750548Lactobacillus fermentum IFO 3956, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014228:4408500*4408500443149923000Xenorhabdus nematophila ATCC 19061, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018528:19320001932000197009938100Lactobacillus helveticus R0052 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015602:19496101949610197209922490Lactobacillus kefiranofaciens ZW3 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015428:21724217244030818585Lactobacillus buchneri NRRL B-30929 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014727:20363402036340205433517996Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,5e-0867.9BLASTN svgBLASTP svg
NC_014228:4360676*4360676438499224317Xenorhabdus nematophila ATCC 19061, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010999:1381497*1381497140718925693Lactobacillus casei, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008528:33126033126035463323374Oenococcus oeni PSU-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008497:32160321605098118822Lactobacillus brevis ATCC 367, complete genome7e-0763.9BLASTN svgBLASTP svg