Pre_GI: BLASTP Hits

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Query: NC_008526:343445:347519 Lactobacillus casei ATCC 334, complete genome

Start: 347519, End: 350287, Length: 2769

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008054:745704:7546887546887574532766Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeCRISPR-associated helicase Cas30842
NC_008529:735233:7468327468327495972766Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated helicase0842
NC_010610:795975:8050038050038077262724Lactobacillus fermentum IFO 3956, complete genomehypothetical protein0840
NC_014727:798191:8099868099868127512766Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated helicase cas30839
NC_015737:2146953:2151963215196321547312769Clostridium sp. SY8519, complete genomeputative helicase2e-168593
NC_013510:3117837:3128254312825431311512898Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated helicase Cas32e-115417
NC_018720:1812000:1820832182083218239993168Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated helicase Cas33e-110400
NC_007333:1743890:1844722184472218476342913Thermobifida fusca YX, complete genomeCRISPR-associated helicase Cas3, core1e-108395
NC_015389:481282:4862164862164893563141Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated helicase Cas32e-108394
NC_006361:4574536:4590706459070645934502745Nocardia farcinica IFM 10152, complete genomehypothetical protein2e-105384
NC_012590:977920:9836789836789864882811Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein9e-98358
NC_013131:4422000:4432703443270344373254623Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse1 family3e-94347
NC_007164:775000:7834007834007862522853Corynebacterium jeikeium K411, complete genomehypothetical protein6e-93342
NC_008278:514600:5190645190645218652802Frankia alni ACN14a, complete genomehypothetical protein; putative DEAD/DEAH box helicase domain1e-92342
NC_019673:1988853:2042190204219020449372748Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated helicase Cas33e-91337
NC_016109:603829:6205116205116233722862Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated helicase7e-79296
NC_013524:1150725:1150725115072511535352811Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeCRISPR-associated helicase Cas34e-77290
NC_007775:723925:7396277396277423082682Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated helicase Cas31e-73278
NC_021150:1677811:1699786169978617024912706Azotobacter vinelandii CA6, complete genomeCRISPR-associated helicase Cas3, core7e-66252
NC_012560:1677798:1699773169977317024782706Azotobacter vinelandii DJ, complete genomeCRISPR-associated helicase Cas3, core7e-66252
NC_008609:2518993:2531914253191425345532640Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated helicase Cas31e-61238
NC_007356:1165760:1208782120878212114752694Dehalococcoides sp. CBDB1, complete genomeputative CRISPR-associated helicase Cas32e-61238
NC_007333:1743890:1835906183590618387402835Thermobifida fusca YX, complete genomecRISPR-associated helicase Cas3, core2e-61238
NC_013159:1422370:1428340142834014308382499Saccharomonospora viridis DSM 43017, complete genomeCRISPR-associated helicase Cas33e-61237
NC_013890:1175931:1184632118463211873102679Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated helicase Cas33e-61237
NC_015387:942974:9498269498269526002775Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated helicase Cas33e-61237
NC_015170:54000:5707057070599612892Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated helicase Cas35e-58226
NC_002932:1851070:1868933186893318715182586Chlorobium tepidum TLS, complete genomehypothetical protein3e-52207
NC_017186:6395435:6449931644993164522102280Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated helicase Cas38e-52206
NC_014318:6395392:6449887644988764521662280Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated helicase Cas38e-52206
NC_015436:1287873:1293817129381712964352619Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated helicase Cas39e-49196
NC_013851:759500:7688657688657714982634Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated helicase Cas31e-48195
NC_009800:2889928:2901786290178629044522667Escherichia coli HS, complete genomeCRISPR-associated helicase Cas37e-44179
NC_010468:1029471:1036180103618010388462667Escherichia coli ATCC 8739, complete genomeCRISPR-associated helicase Cas38e-44179
NC_015676:1663700:1675169167516916779222754Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated helicase Cas31e-43179
NC_012759:2757826:2768387276838727710532667Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-43179
AC_000091:2872000:2883209288320928858752667Escherichia coli W3110 DNA, complete genomeconserved hypothetical protein, member of DEAD box family1e-43179
NC_000913:2873443:2882575288257528852412667Escherichia coli K12, complete genomeconserved protein, member of DEAD box family1e-43179
NC_010473:2963951:2975117297511729777832667Escherichia coli str. K-12 substr. DH10B, complete genomeconserved protein, member of DEAD box family1e-43179
NC_013850:985331:9897249897249924172694Klebsiella variicola At-22 chromosome, complete genomeCRISPR-associated helicase Cas32e-42175
NC_012912:1053618:1059035105903510616502616Dickeya zeae Ech1591, complete genomeCRISPR-associated helicase Cas32e-42174
NC_007643:185135:2063192063192090812763Rhodospirillum rubrum ATCC 11170, complete genomeCRISPR-associated helicase Cas3, core3e-41171
NC_002939:1505701:1512324151232415149752652Geobacter sulfurreducens PCA, complete genomeCRISPR-associated helicase Cas36e-41170
NC_015951:107360:1140161140161167872772Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated helicase Cas37e-41169
NC_014355:1461355:1466467146646714691962730Candidatus Nitrospira defluvii, complete genomeCRISPR-associated helicase Cas33e-40167
NC_002935:2292835:2302097230209723047272631Corynebacterium diphtheriae NCTC 13129, complete genomePutative helicase2e-36154
NC_016782:2235000:2245769224576922483992631Corynebacterium diphtheriae 241 chromosome, complete genomeCRISPR-associated protein1e-35152
NC_016786:2235731:2246368224636822489982631Corynebacterium diphtheriae HC01 chromosome, complete genomeCRISPR-associated protein1e-35152
NC_008340:1075500:1085465108546510880802616Alkalilimnicola ehrlichei MLHE-1, complete genomeCRISPR-associated helicase Cas34e-32140
NC_015966:521703:5467875467875490452259Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated helicase Cas32e-28128
NC_015571:290355:3024493024493047522304Porphyromonas gingivalis TDC60, complete genomeCRISPR-associated helicase Cas32e-1895.1
NC_016610:2489415:2495937249593724980212085Tannerella forsythia ATCC 43037 chromosome, complete genomeCRISPR-associated helicase Cas33e-1894.7
NC_002950:2098454:2106124210612421084602337Porphyromonas gingivalis W83, complete genomeCRISPR-associated helicase Cas32e-1791.7
NC_015966:1316901:1323321132332113254982178Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomemetal dependent phosphohydrolase2e-1791.7
NC_013849:1595924:1614550161455016161781629Ferroglobus placidus DSM 10642 chromosome, complete genomeCRISPR-associated helicase Cas35e-1790.9
NC_009973:77518:9643396433988472415Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeCRISPR-associated helicase Cas31e-1689.4
NC_015388:89000:99529995291013341806Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeCRISPR-associated helicase Cas32e-1378.6
NC_013216:921377:9279929279929302262235Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated helicase Cas32e-1378.6
NC_015680:841783:8449328449328471092178Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas32e-1378.6
NC_020134:1783000:1791244179124417935892346Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD1e-1276.3
NC_009486:1103915:1112028111202811143192292Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated helicase Cas36e-1273.6
NC_000917:40111:6883068830711092280Archaeoglobus fulgidus DSM 4304, complete genomeATP-dependent RNA helicase, putative4e-0964.3
NC_015865:685882:6936206936206959262307Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated helicase Cas3-like protein3e-0861.2