Pre_GI: BLASTP Hits

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Query: NC_008526:2489196:2499347 Lactobacillus casei ATCC 334, complete genome

Start: 2499347, End: 2499814, Length: 468

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:2536705:254329625432962543763468Lactobacillus rhamnosus Lc 705, complete genometranscriptional regulator CtsR7e-72268
NC_004668:3156247:316002431600243160491468Enterococcus faecalis V583, complete genometranscriptional regulator CtsR1e-34145
NC_007929:210088:231806231806232273468Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator ctsR5e-31133
NC_015975:267994:280758280758281225468Lactobacillus ruminis ATCC 27782 chromosome, complete genometranscriptional regulator7e-31132
NC_017208:64500:963459634596806462Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional regulator ctsR7e-29125
NC_011567:75306:889368893689397462Anoxybacillus flavithermus WK1, complete genomeTranscriptional repressor of class III stress genes, CtsR7e-28122
NC_004116:1827351:182735118273511827815465Streptococcus agalactiae 2603V/R, complete genometranscriptional regulator CtsR2e-26117
NC_002570:126500:132792132792133262471Bacillus halodurans C-125, complete genometranscriptional repressor of class III stress genes8e-26115
NC_010382:4479464:449712544971254497622498Lysinibacillus sphaericus C3-41, complete genometranscriptional regulator5e-25113
NC_004193:79588:109439109439109906468Oceanobacillus iheyensis HTE831, complete genometranscriptional repressor of class III stress genes1e-24111
NC_018704:81733:107065107065107526462Amphibacillus xylanus NBRC 15112, complete genometranscriptional regulator CtsR4e-23107
NC_018665:71677:929409294093395456Exiguobacterium antarcticum B7 chromosome, complete genomeTranscriptional repressor, CtsR2e-22104
NC_010556:71776:930049300493459456Exiguobacterium sibiricum 255-15, complete genometranscriptional repressor, CtsR3e-22103
NC_019903:421000:426292426292426762471Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,transcriptional repressor of class III stress genes4e-22103
NC_011999:2023248:202463920246392025112474Macrococcus caseolyticus JCSC5402, complete genometranscriptional regulator CtsR8e-2199.4
NC_015565:173774:191692191692192219528Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetranscriptional repressor, CtsR8e-2199.4
NC_014219:83888:102499102499102975477Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional repressor, CtsR1e-2099
NC_012673:1600242:160753316075331608009477Exiguobacterium sp. AT1b, complete genometranscriptional repressor, CtsR2e-2097.8
NC_014378:131810:144249144249144734486Acetohalobium arabaticum DSM 5501 chromosome, complete genometranscriptional repressor, CtsR4e-2097.1
NC_014654:2138794:214546121454612145928468Halanaerobium sp. 'sapolanicus' chromosome, complete genometranscriptional repressor, CtsR5e-2096.7
NC_004461:277291:282683282683283144462Staphylococcus epidermidis ATCC 12228, complete genomectsR protein6e-2096.3
NC_011899:86800:102182102182102655474Halothermothrix orenii H 168, complete genometranscriptional repressor, CtsR7e-2096.3
NC_014152:241776:260413260413260871459Thermincola sp. JR, complete genometranscriptional repressor, CtsR2e-1994.7
NC_013316:1:407064070641170465Clostridium difficile R20291, complete genometranscriptional regulator3e-1994
NC_015678:1443178:144887114488711449335465Streptococcus parasanguinis ATCC 15912 chromosome, complete genometranscriptional regulator CtsR1e-1892.4
NC_012926:1910882:193160119316011932059459Streptococcus suis BM407 chromosome, complete genometranscriptional regulator2e-1891.7
NC_012924:1860631:188135018813501881808459Streptococcus suis SC84, complete genometranscriptional regulator2e-1891.7
NC_009443:1860390:188110918811091881567459Streptococcus suis 98HAH33, complete genometranscriptional regulator CtsR2e-1891.7
NC_009442:1865244:188173618817361882194459Streptococcus suis 05ZYH33 chromosome, complete genomeCtsR family transcriptional regulator2e-1891.7
NC_012925:1776450:179294117929411793399459Streptococcus suis P1/7, complete genometranscriptional regulator2e-1891.7
NC_009785:2049395:205183120518312052289459Streptococcus gordonii str. Challis substr. CH1, complete genometranscription regulator ctsR6e-1889.7
NC_021182:4602683:460947146094714609929459Clostridium pasteurianum BC1, complete genometranscriptional repressor of class III stress genes3e-1787.4
NC_007503:2098980:210770621077062108179474Carboxydothermus hydrogenoformans Z-2901, complete genometranscriptional regulator CtsR6e-1786.3
NC_019970:336472:346874346874347386513Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional repressor of class III stress genes4e-1683.6
NC_004557:2777291:278374227837422784200459Clostridium tetani E88, complete genometranscriptional regulator ctsR6e-1683.2
NC_020134:301500:304168304168304626459Clostridium stercorarium subsp. stercorarium DSM 8532, completetranscriptional regulator CtsR2e-1581.3
NC_009495:3735703:374229637422963742760465Clostridium botulinum A str. ATCC 3502 chromosome, complete genometransciptional repressor CtsR7e-1579.7
NC_012563:4004709:401022240102224010686465Clostridium botulinum A2 str. Kyoto, complete genometransciptional repressor CtsR7e-1579.7
NC_010520:3837378:384289238428923843356465Clostridium botulinum A3 str. Loch Maree, complete genometransciptional repressor CtsR7e-1579.7
NC_010516:3807780:381329438132943813758465Clostridium botulinum B1 str. Okra, complete genometransciptional repressor CtsR7e-1579.7
NC_009697:3711692:371828537182853718749465Clostridium botulinum A str. ATCC 19397 chromosome, completetransciptional repressor CtsR7e-1579.7
NC_009698:3609881:361539436153943615858465Clostridium botulinum A str. Hall chromosome, complete genometransciptional repressor CtsR7e-1579.7
NC_009699:3839575:384508938450893845553465Clostridium botulinum F str. Langeland chromosome, complete genometransciptional repressor CtsR7e-1579.7
NC_017297:3838189:384370338437033844167465Clostridium botulinum F str. 230613 chromosome, complete genometransciptional repressor CtsR7e-1579.7
NC_014328:4471995:447758344775834478065483Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional repressor6e-1579.7
NC_012658:3827500:383301938330193833483465Clostridium botulinum Ba4 str. 657 chromosome, complete genometransciptional repressor CtsR6e-1579.7
NC_009706:165913:181307181307181792486Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator3e-1477.8
NC_011837:165913:181307181307181792486Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1477.8
NC_009012:2100000:211548221154822115943462Clostridium thermocellum ATCC 27405, complete genomeFirmicute transcriptional repressor of class III stress genes2e-1477.8
NC_010674:192951:213673213673214128456Clostridium botulinum B str. Eklund 17B, complete genometranscriptional regulator CtsR3e-1477.4
NC_008261:3014373:301492030149203015375456Clostridium perfringens ATCC 13124, complete genometranscriptional repressor4e-1477
NC_003366:2788268:279228127922812792736456Clostridium perfringens str. 13, complete genometranscriptional repressor of class III stress genes4e-1477
NC_010723:173280:215468215468215923456Clostridium botulinum E3 str. Alaska E43, complete genometranscriptional regulator CtsR6e-1476.3
NC_008262:2649289:265847126584712658926456Clostridium perfringens SM101, complete genometranscriptional repressor1e-1375.1
NC_003030:3324834:333148533314853331946462Clostridium acetobutylicum ATCC 824, complete genomeTransciptional regulator CTSR2e-1375.1
NC_015687:3326461:333311233331123333573462Clostridium acetobutylicum DSM 1731 chromosome, complete genometransciptional regulator CTSR2e-1375.1
NC_015425:198315:207543207543208001459Clostridium botulinum BKT015925 chromosome, complete genometranscription regulator ctsR3e-1374.3
NC_008593:196257:202869202869203327459Clostridium novyi NT, complete genometranscription regulator ctsR7e-1372.8
NC_016884:256598:274011274011274475465Sulfobacillus acidophilus DSM 10332 chromosome, complete genometranscriptional regulator2e-1168.2
NC_015757:263938:281351281351281815465Sulfobacillus acidophilus TPY chromosome, complete genometranscriptional repressor2e-1168.2