Pre_GI: BLASTP Hits

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Query: NC_008526:1924761:1949483 Lactobacillus casei ATCC 334, complete genome

Start: 1949483, End: 1950646, Length: 1164

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012891:1573435:1603208160320816044341227Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,putative phage integrase4e-37155
NC_004070:747146:7492137492137504091197Streptococcus pyogenes MGAS315, complete genomeputative integrase - phage associated3e-35149
NC_004606:1107500:1146302114630211475431242Streptococcus pyogenes SSI-1, complete genomeputative integrase (phage associated)3e-35149
NC_012471:781063:7837087837087848741167Streptococcus equi subsp. equi 4047, complete genomeintegrase2e-34147
NC_008497:1111891:1135879113587911373331455Lactobacillus brevis ATCC 367, complete genomeIntegrase5e-1892.4
NC_009785:387910:3914763914763926301155Streptococcus gordonii str. Challis substr. CH1, complete genomesite-specific recombinase, phage integrase family5e-1789
NC_014551:865254:8700578700578712051149Bacillus amyloliquefaciens DSM 7, complete genomeTyrosine recombinase xerC3e-1686.7
NC_014391:16188:1618816188173391152Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein5e-1479
NC_013757:3100515:3113794311379431149271134Geodermatophilus obscurus DSM 43160, complete genomeintegrase family protein1e-1274.7
NC_015656:454500:466640466640467551912Frankia symbiont of Datisca glomerata chromosome, complete genome1e-1274.3
NC_014210:723719:7400287400287412421215Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein1e-1274.3
NC_013235:508585:5258015258015269161116Nakamurella multipartita DSM 44233, complete genomeintegrase family protein3e-1273.6
NC_011899:355638:3706253706253718001176Halothermothrix orenii H 168, complete genomephage integrase family protein3e-1273.2
NC_015697:1480552:1484807148480714860391233Lactobacillus reuteri SD2112 chromosome, complete genomephage integrase family site-specific recombinase3e-1273.2
NC_014551:1872000:1877913187791318790581146Bacillus amyloliquefaciens DSM 7, complete genomephage integrase6e-1272
NC_015275:1034230:1035408103540810366311224Clostridium lentocellum DSM 5427 chromosome, complete genomeintegrase family protein9e-1271.6
NC_008699:1132790:1159085115908511602361152Nocardioides sp. JS614, complete genomephage integrase family protein2e-1170.5
NC_008699:1816392:1833425183342518345611137Nocardioides sp. JS614, complete genomephage integrase family protein2e-1170.1
NC_010999:1245239:1248554124855412497381185Lactobacillus casei, complete genomeIntegrase3e-1169.7
NC_017190:3166000:3179409317940931805661158Bacillus amyloliquefaciens LL3 chromosome, complete genometyrosine recombinase XerC6e-1168.9
NC_014666:13876:3056730567317601194Frankia sp. EuI1c chromosome, complete genomeintegrase family protein8e-1168.6
NC_014721:2135500:215045321504532151325873Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein7e-1168.6
NC_013757:3613438:363046536304653631445981Geodermatophilus obscurus DSM 43160, complete genome9e-1168.2
NC_019697:1879769:1885406188540618864881083Chamaesiphon minutus PCC 6605, complete genomesite-specific recombinase XerD1e-1067.8
NC_017955:693303:7105207105207117371218Modestobacter marinus, complete genomeintegrase1e-1067.8
NC_006270:1415001:1421737142173714228761140Bacillus licheniformis ATCC 14580, complete genomeLambda integrase-like protein(phage related)1e-1067.8
NC_006322:1415863:1422600142260014237391140Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1067.8
NC_002662:447236:4472364472364483691134Lactococcus lactis subsp. lactis Il1403, complete genomeintegrase2e-1067.4
NC_003888:3602753:3602753360275336039071155Streptomyces coelicolor A3(2), complete genomeintegrase2e-1067.4
NC_014721:729942:7313247313247325021179Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein2e-1067.4
NC_013198:1095591:1102527110252711037111185Lactobacillus rhamnosus GG, complete genomephage protein, site-specific recombinase, integrase family3e-1066.6
NC_017190:852171:855957855957856940984Bacillus amyloliquefaciens LL3 chromosome, complete genometyrosine recombinase XerC4e-1066.2
NC_015957:8777644:8782868878286887841331266Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase family protein5e-1065.9
NC_008555:1204000:1207736120773612088691134Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage integrase family protein8e-1065.1
NC_016114:4210173:4236833423683342379811149Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegrase2e-0964.3
NC_015312:1191633:1191633119163311929731341Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeintegrase family protein2e-0963.9
NC_015737:2691246:2720265272026527213951131Clostridium sp. SY8519, complete genomehypothetical protein2e-0963.9
NC_018750:5293829:5316938531693853180921155Streptomyces venezuelae ATCC 10712, complete genomephage integrase family protein5e-0962.8
NC_005835:1773482:1778579177857917797571179Thermus thermophilus HB27, complete genomeDNA integration/recombination/invertion protein5e-0962.4
NC_007644:1847000:1850618185061818517901173Moorella thermoacetica ATCC 39073, complete genomePhage integrase5e-0962.4
NC_008346:2579756:259159725915972592514918Syntrophomonas wolfei subsp. wolfei str. Goettingen, completephage integrase6e-0962
NC_014650:2969866:2985102298510229862921191Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase7e-0962
NC_007297:1406796:1424880142488014259591080Streptococcus pyogenes MGAS5005, complete genomephi5005.3 integrase1e-0861.6
NC_008023:1426687:1443215144321514443031089Streptococcus pyogenes MGAS2096, complete genomeDNA integration/recombination/inversion protein9e-0961.6
NC_008021:1401249:1419325141932514204131089Streptococcus pyogenes MGAS9429, complete genomeDNA integration/recombination/inversion protein9e-0961.6
NC_015635:5222000:5244912524491252461351224Microlunatus phosphovorus NM-1, complete genomeputative integrase9e-0961.6
NC_013740:2141523:2148685214868521498781194Acidaminococcus fermentans DSM 20731, complete genomeintegrase family protein1e-0861.2
NC_013929:3986272:3990747399074739919641218Streptomyces scabiei 87.22 chromosome, complete genomeintegrase1e-0861.2
NC_007575:973559:9778509778509790311182Sulfurimonas denitrificans DSM 1251, complete genomePhage integrase2e-0860.5
NC_020410:1123121:112994211299421130733792Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeDNA integration/recombination/invertion protein4e-0859.7
NC_010610:269380:2925302925302936331104Lactobacillus fermentum IFO 3956, complete genomeintegrase4e-0859.7
NC_012490:3094857:3112718311271831138811164Rhodococcus erythropolis PR4, complete genomeintegrase3e-0859.7
NC_015425:1295261:1296334129633412974071074Clostridium botulinum BKT015925 chromosome, complete genomephage integrase family site specific recombinase4e-0859.3
NC_010610:535790:5394135394135405341122Lactobacillus fermentum IFO 3956, complete genomeintegrase5e-0859.3
NC_015656:381554:3852123852123865521341Frankia symbiont of Datisca glomerata chromosome, complete genomeintegrase family protein6e-0858.9
NC_013205:1123280:1130843113084311320181176Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,integrase family protein6e-0858.9
NC_015953:1860946:1866376186637618676831308Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase family protein9e-0858.5
NC_020207:1906803:1923725192372519248641140Enterococcus faecium NRRL B-2354, complete genomePhage integrase1e-0758.2
NC_014638:321382:3346733346733358661194Bifidobacterium bifidum PRL2010 chromosome, complete genomeDNA integration/recombination/inversion protein1e-0758.2
NC_013921:1396500:1398270139827013994661197Thermoanaerobacter italicus Ab9 chromosome, complete genomeintegrase family protein1e-0757.8
NC_012526:1576775:1583384158338415847181335Deinococcus deserti VCD115, complete genomeputative Integrase2e-0757.4
NC_013891:1639694:1661804166180416630241221Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomephage integrase, putative2e-0757
NC_011295:33500:368853688537751867Coprothermobacter proteolyticus DSM 5265, complete genometyrosine recombinase XerD2e-0757
NC_007777:135222:1403051403051416001296Frankia sp. CcI3, complete genomephage integrase3e-0756.6
NC_010610:1178430:1200098120009812012011104Lactobacillus fermentum IFO 3956, complete genomeintegrase3e-0756.6
NC_015385:2050648:2073403207340320745961194Treponema succinifaciens DSM 2489 chromosome, complete genomeintegrase family protein3e-0756.6
NC_013947:460398:4655954655954670581464Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeintegrase family protein4e-0756.2
NC_012803:2195808:2235293223529322364801188Micrococcus luteus NCTC 2665, complete genomesite-specific recombinase, integrase family4e-0756.2
NC_017179:1683199:1683199168319916843291131Clostridium difficile BI1, complete genomeprophage lambdaba04, site-specific recombinase, phage integrase family protein4e-0756.2
NC_020133:5485528:5502600550260055037691170Mycobacterium liflandii 128FXT, complete genomeprophage integrase4e-0756.2
NC_008148:2231045:2231045223104522321811137Rubrobacter xylanophilus DSM 9941, complete genomephage integrase4e-0756.2
NC_015576:808926:8197348197348209031170Mycobacterium sp. JDM601 chromosome, complete genomeprophage integrase3e-0756.2
NC_009921:6483660:6508769650876965099771209Frankia sp. EAN1pec, complete genomeintegrase family protein3e-0756.2
NC_016048:184500:2259682259682271161149Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase6e-0755.8
NC_012803:691215:714743714743715681939Micrococcus luteus NCTC 2665, complete genomesite-specific recombinase, integrase family5e-0755.8
NC_011773:4296082:4296082429608242971671086Bacillus cereus AH820 chromosome, complete genometransposase A5e-0755.8
NC_016948:678939:6847016847016858551155Mycobacterium intracellulare MOTT-64 chromosome, complete genomeprophage integrase5e-0755.8
NC_007907:960104:974182974182975108927Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0755.8
NC_009455:53000:820568205683015960Dehalococcoides sp. BAV1 chromosome, complete genomephage integrase family protein6e-0755.5
NC_013235:1354443:1359930135993013617831854Nakamurella multipartita DSM 44233, complete genomeintegrase family protein6e-0755.5
NC_015975:752927:7675827675827686791098Lactobacillus ruminis ATCC 27782 chromosome, complete genomeintegrase7e-0755.5
NC_014624:224213:2456182456182469731356Eubacterium limosum KIST612 chromosome, complete genomephage integrase family protein7e-0755.5
NC_008699:1673181:1714744171474417158501107Nocardioides sp. JS614, complete genomephage integrase family protein7e-0755.5
NC_003450:1903110:1985439198543919865901152Corynebacterium glutamicum ATCC 13032, complete genomeintegrase7e-0755.5
NC_014964:2272413:2294058229405822951761119Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeintegrase family protein9e-0755.1
NC_014624:3463272:348210034821003483014915Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein8e-0755.1
NC_014550:7560:2566025660270091350Arthrobacter arilaitensis Re117, complete genome8e-0755.1
NC_017341:903473:9044389044389056581221Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,pathogenicity island protein, integrase1e-0654.7
NC_012522:4299287:4304961430496143060671107Rhodococcus opacus B4, complete genomeputative integrase1e-0654.7
NC_020064:3790472:379655937965593797110552Serratia marcescens FGI94, complete genomesite-specific recombinase XerD1e-0654.7
NC_007626:959684:994461994461995318858Magnetospirillum magneticum AMB-1, complete genomeIntegrase1e-0654.7
NC_014210:144036:1495391495391508071269Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein1e-0654.7
NC_014168:869746:8743398743398754511113Segniliparus rotundus DSM 44985 chromosome, complete genomeintegrase family protein2e-0653.9
NC_015520:2612767:261303226130322613904873Mahella australiensis 50-1 BON chromosome, complete genomeintegrase family protein3e-0653.5
NC_020134:420500:4225864225864238031218Clostridium stercorarium subsp. stercorarium DSM 8532, completetyrosine recombinase XerC-like protein3e-0653.1
NC_015737:831792:8509168509168520191104Clostridium sp. SY8519, complete genomehypothetical protein4e-0652.8
NC_009253:829913:844973844973845854882Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein4e-0652.8
NC_012731:560199:587739587739588329591Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomerecombinase involved in phase variation5e-0652.8
NC_014974:404015:4125354125354137101176Thermus scotoductus SA-01 chromosome, complete genomeDNA integration/recombination/inversion protein6e-0652.4
NC_014624:1204881:122192712219271222838912Eubacterium limosum KIST612 chromosome, complete genomesite-specific recombinase XerC6e-0652.4
NC_015873:1193843:1212842121284212139181077Megasphaera elsdenii DSM 20460, complete genomesite-specific recombinase6e-0652.4
NC_014335:2274774:229993922999392300787849Bacillus cereus biovar anthracis str. CI chromosome, completeDNA integration/recombination/invertion protein6e-0652.4
NC_015873:238187:2431042431042442911188Megasphaera elsdenii DSM 20460, complete genomeintegrase family protein5e-0652.4
NC_014650:2969866:2987769298776929889231155Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase7e-0652
NC_008253:334467:406588406588407151564Escherichia coli 536, complete genomeputative phage integrase8e-0652
NC_008563:318993:351484351484352086603Escherichia coli APEC O1, complete genomehypothetical protein1e-0551.6
NC_007946:289425:349892349892350494603Escherichia coli UTI89, complete genometype 1 fimbriae regulatory protein FimX1e-0551.6
NC_017904:666285:6702366702366713931158Mycobacterium sp. MOTT36Y chromosome, complete genomeprophage integrase1e-0551.6
NC_015977:3215770:3260060326006032612921233Roseburia hominis A2-183 chromosome, complete genomeintegrase/recombinase, XerC/CodV family protein9e-0651.6
NC_009328:2161116:2201942220194222030811140Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposition regulatory protein TnpA9e-0651.6
NC_009328:3504454:3529966352996635311051140Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposition regulatory protein TnpA9e-0651.6
NC_011415:351810:364008364008364571564Escherichia coli SE11 chromosome, complete genomeputative phage integrase9e-0651.6
NC_019673:2051363:2096764209676420978401077Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein9e-0651.6
NC_004431:364000:414420414420415022603Escherichia coli CFT073, complete genomeType 1 fimbriae Regulatory protein fimB1e-0551.6