Pre_GI: BLASTP Hits

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Query: NC_008525:1013979:1032326 Pediococcus pentosaceus ATCC 25745, complete genome

Start: 1032326, End: 1033168, Length: 843

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014219:192555:206560206560207414855Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, RpiR family4e-25115
NC_010067:1782998:179623817962381797119882Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-23109
NC_003197:1207597:121527512152751216156882Salmonella typhimurium LT2, complete genomeputative transcriptional regulator5e-23108
NC_011094:1166271:117395011739501174831882Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, RpiR family protein5e-23108
NC_016810:1163919:117159811715981172479882Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator5e-23108
NC_016856:1165941:117362011736201174501882Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator5e-23108
NC_016860:1205282:121296112129611213842882Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator5e-23108
NC_016863:1165232:117291111729111173792882Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator5e-23108
NC_020418:1397112:141023714102371411124888Morganella morganii subsp. morganii KT, complete genomeSialic acid utilization regulator, RpiR family5e-23108
NC_006905:1186895:119457411945741195455882Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator9e-23107
NC_011080:1209935:121761412176141218495882Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, RpiR family9e-23107
NC_003198:1117687:112536611253661126247882Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator9e-23107
NC_010102:1979742:199189419918941992775882Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-23107
NC_011083:1216500:122000412200041220885882Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, RpiR family9e-23107
NC_017046:1164176:117185511718551172679825Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator1e-22107
NC_004631:1842050:185456618545661855447882Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator9e-23107
NC_011205:1186097:119377511937751194656882Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853RpiR family transcriptional regulator9e-23107
NC_011274:1094379:110205811020581102939882Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator9e-23107
NC_011294:1085447:109314410931441094025882Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator9e-23107
NC_012125:2646792:265912026591202660001882Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator9e-23107
NC_016831:1905289:192213519221351923016882Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator9e-23107
NC_016832:1838220:185141618514161852297882Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,RpiR-family transcriptional regulator9e-23107
NC_016857:1163919:117159811715981172512915Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator7e-23107
NC_006511:1770000:178216817821681783049882Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator3e-22105
NC_011147:1763681:177735117773511778232882Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator3e-22105
NC_013515:1125739:113914011391401139958819Streptobacillus moniliformis DSM 12112, complete genometranscriptional regulator, RpiR family1e-21103
NC_011661:1807101:181101118110111811856846Dictyoglomus turgidum DSM 6724, complete genometranscriptional regulator, RpiR family8e-21100
NC_014377:321949:336280336280337122843Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, RpiR family2e-2099.8
NC_009708:1497898:151619215161921517070879Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRpiR family transcriptional regulator2e-1996.7
NC_008314:1202963:120453312045331205366834Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator4e-1995.5
NC_013171:1677543:168050016805001681339840Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, RpiR family2e-1893.2
NC_004193:375416:641553641553642401849Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator2e-1892.8
NC_017511:852260:870245870245871129885Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative RpiR-family transcriptional regulator3e-1892.4
NC_014410:2329838:234588623458862346728843Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, RpiR family4e-1892
NC_015389:175406:182891182891183802912Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family3e-1789.4
NC_008358:2574343:257961025796102580443834Hyphomonas neptunium ATCC 15444, complete genometranscriptional regulator, RpiR family5e-1788.6
NC_007651:1726472:1749745174974517516701926Burkholderia thailandensis E264 chromosome I, complete sequenceglucokinase/transcriptional regulator, RpiR family, fusion1e-1584
NC_003909:927955:935762935762936625864Bacillus cereus ATCC 10987, complete genometranscriptional regulator, RpiR family, putative1e-1583.6
NC_014841:131308:131308131308132201894Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, RpiR family2e-1583.6
NC_014334:99000:117879117879118748870Lactobacillus casei str. Zhang chromosome, complete genometranscriptional regulator2e-1582.8
NC_004668:3156247:316345631634563164313858Enterococcus faecalis V583, complete genomephosphosugar-binding transcriptional regulator, putative3e-1582.4
NC_020063:2449554:247206824720682472898831Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator3e-1582.4
NC_015634:2933712:295589529558952956770876Bacillus coagulans 2-6 chromosome, complete genomeRpiR family transcriptional regulator4e-1582
NC_007510:973828:9935829935829955101929Burkholderia sp. 383 chromosome 1, complete sequenceGlucokinase6e-1581.6
NC_008800:4013298:402615540261554027015861Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,transcriptional regulator1e-1480.5
NC_016901:2542110:254373725437372544591855Shewanella baltica OS678 chromosome, complete genomeRpiR family transcriptional regulator1e-1480.5
NC_015152:272500:274117274117274971855Spirochaeta sp. Buddy chromosome, complete genomeRpiR family transcriptional regulator7e-1478.2
NC_015224:3892972:390341039034103904270861Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,transcriptional regulator1e-1377.4
NC_013364:2355298:235915723591572360026870Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator2e-1376.3
NC_013361:2591829:259568825956882596557870Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator HexR2e-1376.3
NC_011741:1978500:198239319823931983262870Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator HexR2e-1376.3
CU928160:1978500:198239319823931983262870Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-1376.3
NC_007645:713930:730736730736731593858Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator2e-1376.3
NC_016822:1339058:135362613536261354495870Shigella sonnei 53G, complete genomeDNA-binding transcriptional regulator HexR2e-1376.3
NC_014364:394899:436135436135436983849Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, RpiR family3e-1375.9
NC_010658:1933605:193746419374641938333870Shigella boydii CDC 3083-94, complete genometranscriptional regulator, rpiR family3e-1375.9
NC_021066:601029:611221611221612078858Raoultella ornithinolytica B6, complete genomeDNA-binding transcriptional repressor RpiR3e-1375.9
NC_012912:2553391:257205325720532572922870Dickeya zeae Ech1591, complete genometranscriptional regulator, RpiR family5e-1375.1
NC_012578:1838470:187236418723641873200837Vibrio cholerae M66-2 chromosome I, complete sequencePutative HTH-type transcriptional regulator ybbH6e-1374.7
NC_009457:1444449:147833414783341479170837Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein6e-1374.7
NC_017270:1755552:176398117639811764817837Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSialic acid utilization regulator, RpiR family6e-1374.7
NC_012668:1688500:172144717214471722277831Vibrio cholerae MJ-1236 chromosome 1, complete sequencesialic acid utilization regulator RpiR family7e-1374.7
NC_013421:2306000:230610423061042307030927Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, RpiR family9e-1374.3
NC_007384:1355060:137077813707781371647870Shigella sonnei Ss046, complete genomehypothetical protein8e-1374.3
NC_009485:1222697:123782312378231238635813Bradyrhizobium sp. BTAi1 chromosome, complete genomeRpiR family transcriptional regulator2e-1273.2
NC_014958:629459:631573631573632421849Deinococcus maricopensis DSM 21211 chromosome, complete genomeRpiR family transcriptional regulator4e-1272
NC_007929:1463295:149820914982091499045837Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, RpiR family1e-1170.5
NC_011741:2715246:272234927223492723197849Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-1170.1
CU928160:2715246:272234927223492723197849Escherichia coli IAI1 chromosome, complete genomefused putative DNA-binding transcriptional regulator; putative isomerase2e-1170.1
NC_016445:1363831:139663113966311397446816Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completesialic acid utilization regulator RpiR family2e-1169.7
NC_013855:1268424:128469812846981285603906Azospirillum sp. B510 plasmid pAB510a, complete sequenceDNA-binding transcriptional regulator3e-1169.3
NC_017188:2512357:252539225253922526117726Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein4e-1168.9
NC_017191:2514401:252743625274362528161726Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein4e-1168.9
NC_014039:1238500:124142412414241242296873Propionibacterium acnes SK137 chromosome, complete genometranscriptional regulator, RpiR family4e-1168.6
NC_006085:1234587:123938512393851240257873Propionibacterium acnes KPA171202, complete genomeputative transcriptional regulator5e-1168.6
NC_012691:2146473:215826621582662159144879Tolumonas auensis DSM 9187, complete genometranscriptional regulator, RpiR family5e-1168.6
NC_009725:2517428:253457325345732535298726Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein5e-1168.6
NC_016512:1211653:121444812144481215320873Propionibacterium acnes TypeIA2 P.acn17 chromosome, completetranscriptional regulator7e-1168.2
NC_016511:1212282:121507712150771215949873Propionibacterium acnes TypeIA2 P.acn31 chromosome, completetranscriptional regulator7e-1168.2
NC_010999:2450974:245456624545662455396831Lactobacillus casei, complete genomeTranscriptional regulator6e-1168.2
NC_010516:359310:364378364378365139762Clostridium botulinum B1 str. Okra, complete genomeputative transcriptional regulator6e-1168.2
NC_009439:4913767:491696849169684917834867Pseudomonas mendocina ymp, complete genomeRpiR family transcriptional regulator8e-1167.8
NC_016516:1203000:120589412058941206766873Propionibacterium acnes TypeIA2 P.acn33 chromosome, completetranscriptional regulator8e-1167.8
NC_016602:2292518:231509123150912315954864Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetranscriptional regulator1e-1067.4
NC_003210:2879906:288124328812432882049807Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-1066.2
NC_009328:3322802:332775633277563328502747Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeregulator1e-0963.9
NC_017347:2437902:244281024428102443574765Staphylococcus aureus subsp. aureus T0131 chromosome, completePhosphosugar-binding transcriptional regulator1e-0963.9
NC_013895:605488:606998606998607921924Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completetranscriptional regulator, RpiR family3e-0962.8
NC_015389:809474:815699815699816547849Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family3e-0962.4
NC_014838:589581:610497610497611387891Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, RpiR family8e-0961.2
NC_010505:5035668:504276550427655043655891Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, RpiR family1e-0860.8
NC_008010:200796:205845205845206717873Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetranscriptional regulator, RpiR family1e-0860.5
NC_006905:3717306:372665337266533727534882Salmonella enterica subsp. enterica serovar Choleraesuis strProtein rpiR1e-0860.5
NC_011750:4719477:472047147204714721361891Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-0859.3
NC_008253:4541915:454482645448264545716891Escherichia coli 536, complete genomeprotein RpiR3e-0859.3
AC_000091:4313167:431677943167794317669891Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional repressor3e-0859.3
CP002516:4431235:444760744476074448497891Escherichia coli KO11, complete genometranscriptional regulator, RpiR family3e-0859.3
NC_010473:4409492:441048644104864411376891Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional repressor3e-0859.3
NC_010468:4305105:432097043209704321860891Escherichia coli ATCC 8739, complete genometranscriptional regulator, RpiR family3e-0859.3
NC_010498:4656716:465771046577104658600891Escherichia coli SMS-3-5, complete genomeHTH-type transcriptional regulator RpiR (Als operon repressor)3e-0859.3
NC_000913:4307471:431012443101244311014891Escherichia coli K12, complete genomeDNA-binding transcriptional repressor3e-0859.3
NC_011415:4582388:458338245833824584272891Escherichia coli SE11 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-0859.3
NC_011742:4569683:457329545732954574185891Escherichia coli S88 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-0859.3
NC_012759:4247865:424885942488594249749891Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-0859.3
NC_009785:130252:132523132523133377855Streptococcus gordonii str. Challis substr. CH1, complete genomephosphosugar-binding transcriptional regulator, RpiR family3e-0859.3
NC_013353:5022196:502319050231905024080891Escherichia coli O103:H2 str. 12009, complete genometranscriptional repressor3e-0859.3
AP010958:5022196:502319050231905024080891Escherichia coli O103:H2 str. 12009 DNA, complete genometranscriptional repressor3e-0859.3
NC_012947:4106031:412229541222954123185891Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeDNA-binding transcriptional repressor RpiR3e-0859.3
NC_008563:4656000:465876746587674659690924Escherichia coli APEC O1, complete genomeputative transcriptional regulator RpiR3e-0859.3
NC_004431:4867648:487126048712604872183924Escherichia coli CFT073, complete genomeProtein rpiR3e-0859.3
NC_016902:4431235:444760744476074448497891Escherichia coli KO11FL chromosome, complete genomeRpiR family transcriptional regulator3e-0859.3
NC_012967:4289929:429092342909234291813891Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-0859.3
NC_009848:720510:738474738474739238765Bacillus pumilus SAFR-032, complete genometranscriptional regulator5e-0858.5
NC_019842:2575000:258860625886062589331726Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,enolase7e-0858.2
NC_015389:114469:120227120227121075849Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family1e-0757.4
NC_020410:2509057:253812525381252538850726Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeTranscriptional regulator, RpiR family / Phosphosugar-binding transcriptional regulator, RpiR family1e-0757.4
NC_020272:1384525:138963613896361390361726Bacillus amyloliquefaciens IT-45, complete genomeenolase2e-0756.6
NC_014551:2510000:255888125588812559606726Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein4e-0755.5
NC_008262:2824503:283909428390942839822729Clostridium perfringens SM101, complete genometranscriptional regulator, RpiR family5e-0755.1
NC_012724:2443500:244352924435292444449921Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, RpiR family protein1e-0653.5
NC_014551:809025:835915835915836676762Bacillus amyloliquefaciens DSM 7, complete genometranscriptional activator of maltose utilization2e-0653.1
NC_017188:753039:779922779922780683762Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional activator of maltose utilization2e-0653.1
NC_017190:794820:821706821706822467762Bacillus amyloliquefaciens LL3 chromosome, complete genometranscriptional activator of maltose utilization2e-0653.1
NC_017191:754453:781340781340782101762Bacillus amyloliquefaciens XH7 chromosome, complete genomeHTH-type transcriptional regulator GlvR2e-0653.1
NC_014206:3391352:339784933978493398616768Geobacillus sp. C56-T3 chromosome, complete genomeRpiR family transcriptional regulator6e-0651.6
NC_013171:497499:519956519956520705750Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, RpiR family8e-0651.2