Pre_GI: BLASTP Hits

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Query: NC_008513:13484:14426 Buchnera aphidicola str. Cc (Cinara cedri), complete genome

Start: 14426, End: 14992, Length: 567

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is found in the cedar aphid, Cinara cedri. Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015662:15641:156411564116123483Buchnera aphidicola (Cinara tujafilina) chromosome, completeputative methyltransferase1e-35149
NC_004545:15650:245952459525185591Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeputative methylase5e-29127
NC_011742:3799788:381825038182503818846597Escherichia coli S88 chromosome, complete genome16S rRNA m(2)G966-methyltransferase2e-25115
NC_008563:3888232:390351039035103904106597Escherichia coli APEC O1, complete genomeputative methyltransferase2e-25115
NC_007946:3855445:387071538707153871311597Escherichia coli UTI89, complete genomehypothetical protein2e-25115
NC_013960:2261487:228324722832472283825579Nitrosococcus halophilus Nc4 chromosome, complete genomemethyltransferase2e-21101
NC_008344:2465042:246772724677272468281555Nitrosomonas eutropha C91, complete genomeputative methyltransferase2e-1995.1
NC_010524:3914880:391488039148803915542663Leptothrix cholodnii SP-6, complete genomemethyltransferase1e-1789.7
NC_007404:387827:407826407826408398573Thiobacillus denitrificans ATCC 25259, complete genomeConserved hypothetical protein 953e-1684.7
NC_003919:2956404:295974229597422960365624Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-1582.4
NC_007508:3065621:306895930689593069582624Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative methyltransferase5e-1580.9
NC_014964:1309845:133028013302801330834555Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completemethyltransferase5e-1580.5
NC_015958:1422319:144209614420961442650555Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomemethyltransferase6e-1580.5
NC_016584:4905310:490531049053104905864555Desulfosporosinus orientis DSM 765 chromosome, complete genomeRsmD family RNA methyltransferase7e-1580.5
NC_009484:1627734:164214616421461642703558Acidiphilium cryptum JF-5 chromosome, complete genomeputative methyltransferase8e-1580.1
NC_015672:101878:119860119860120396537Flexistipes sinusarabici DSM 4947 chromosome, complete genomemethyltransferase3e-1478.2
NC_018515:3909646:391015739101573910708552Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRsmD family RNA methyltransferase6e-1477
NC_010084:534937:540192540192540806615Burkholderia multivorans ATCC 17616 chromosome 1, completemethyltransferase1e-1376.3
NC_017513:115870:123215123215123784570Neisseria meningitidis G2136 chromosome, complete genomemethyltransferase family protein1e-1376.3
NC_017516:123618:130968130968131537570Neisseria meningitidis H44/76 chromosome, complete genomemethyltransferase family protein1e-1376.3
NC_013016:2041890:205596720559672056536570Neisseria meningitidis alpha14 chromosome, complete genomeputative DNA methylase1e-1375.9
NC_017501:121902:129246129246129815570Neisseria meningitidis 8013, complete genomeputative methylase1e-1375.9
NC_010688:2052619:206927920692792070079801Xanthomonas campestris pv. campestris, complete genomePutative methyltransferase2e-1375.5
NC_017512:2116295:213036821303682130937570Neisseria meningitidis WUE 2594, complete genomeputative methylase3e-1374.7
NC_002976:707827:709691709691710233543Staphylococcus epidermidis RP62A, complete genomehypothetical protein4e-1374.7
NC_004461:813748:815612815612816154543Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein4e-1374.7
NC_010120:2055803:206988120698812070456576Neisseria meningitidis 053442, complete genomeDNA methylase6e-1373.9
NC_015177:258504:263874263874264428555Pedobacter saltans DSM 12145 chromosome, complete genomemethyltransferase1e-1273.2
NC_018507:115346:121198121198121812615Candidatus Portiera aleyrodidarum BT-B chromosome, complete genome16S rRNA m(2)G966 methyltransferase2e-1272.4
NC_018677:111500:114765114765115379615Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRibosomal RNA small subunit methyltransferase D2e-1272.4
NC_008820:808886:825065825065825709645Prochlorococcus marinus str. MIT 9303, complete genomeN6-adenine-specific methylase2e-1272
NC_002937:1578213:159975115997511600323573Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completemethyltransferase, putative2e-1272
NC_015185:792933:792933792933793514582Desulfurobacterium thermolithotrophum DSM 11699 chromosome,methyltransferase3e-1271.2
NC_007799:186000:200523200523201074552Ehrlichia chaffeensis str. Arkansas, complete genomeputative methyltransferase4e-1271.2
NC_013939:148706:160910160910161440531Deferribacter desulfuricans SSM1, complete genomeDNA methylase9e-1270.1
NC_006448:1451729:146242914624291462977549Streptococcus thermophilus LMG 18311, complete genomemethyltransferase, putative2e-1168.9
NC_011593:391297:404983404983405594612Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,methyltransferase2e-1168.9
NC_017219:391100:404777404777405388612Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative methylase2e-1168.9
NC_014483:1954856:195968719596871960328642Paenibacillus polymyxa E681 chromosome, complete genomeN6-adenine-specific methylase2e-1168.6
NC_013517:2607043:260815726081572608708552Sebaldella termitidis ATCC 33386, complete genomemethyltransferase2e-1168.6
NC_009881:724269:727138727138727716579Rickettsia akari str. Hartford, complete genomeN6-adenine-specific methylase2e-1168.6
NC_008278:6279553:629181562918156292387573Frankia alni ACN14a, complete genomeputative RNA methylase; putative putative SAM-dependent methyltransferase domain3e-1168.2
NC_019892:9280367:929567492956749296354681Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRsmD family RNA methyltransferase3e-1168.2
NC_019892:9280367:928413992841399284819681Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRsmD family RNA methyltransferase3e-1168.2
NC_013385:90331:105487105487106056570Ammonifex degensii KC4, complete genomemethyltransferase3e-1168.2
NC_020409:363114:375375375375375935561Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeMethyltransferase4e-1167.8
NC_015160:2295010:229809622980962298629534Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein4e-1167.8
NC_016929:474000:490852490852491424573Rickettsia canadensis str. CA410 chromosome, complete genomeN6-adenine-specific methylase6e-1167
NC_009879:475500:491538491538492110573Rickettsia canadensis str. McKiel, complete genomeN6-adenine-specific methylase8e-1166.6
NC_010483:1441614:145363314536331454160528Thermotoga sp. RQ2, complete genomemethyltransferase1e-1066.2
NC_017058:671000:686737686737687315579Rickettsia australis str. Cutlack chromosome, complete genomeN6-adenine-specific methylase2e-1065.5
NC_006833:1011537:105052310505231051071549Wolbachia endosymbiont strain TRS of Brugia malayi, completeN6-adenine-specific methylase3e-1065.1
NC_012026:21385:324083240832965558Anaplasma marginale str. Florida, complete genomehypothetical protein3e-1064.7
NC_018664:1729794:173539517353951735958564Clostridium acidurici 9a chromosome, complete genomeRNA methyltransferase, RsmD family3e-1064.7
NC_011661:1143787:116087911608791161436558Dictyoglomus turgidum DSM 6724, complete genomemethyltransferase4e-1064.7
NC_014550:1581812:164688016468801647464585Arthrobacter arilaitensis Re117, complete genomeputative site-specific DNA-methyltransferase (adenine specific)5e-1064.3
NC_017150:2689920:269176126917612692345585Acetobacter pasteurianus IFO 3283-01-42C, complete genomeN6-adenine-specific methylase5e-1063.9
NC_017146:2782325:278382927838292784413585Acetobacter pasteurianus IFO 3283-26, complete genomeN6-adenine-specific methylase5e-1063.9
NC_017125:2782283:278378727837872784371585Acetobacter pasteurianus IFO 3283-22, complete genomeN6-adenine-specific methylase5e-1063.9
NC_017121:2781000:278256427825642783148585Acetobacter pasteurianus IFO 3283-07, complete genomeN6-adenine-specific methylase5e-1063.9
NC_017111:2779321:278116227811622781746585Acetobacter pasteurianus IFO 3283-32, complete genomeN6-adenine-specific methylase5e-1063.9
NC_017108:2779303:278114427811442781728585Acetobacter pasteurianus IFO 3283-12, complete genomeN6-adenine-specific methylase5e-1063.9
NC_017100:2782303:278380727838072784391585Acetobacter pasteurianus IFO 3283-03, complete genomeN6-adenine-specific methylase5e-1063.9
NC_013209:2782500:278401527840152784599585Acetobacter pasteurianus IFO 3283-01, complete genomeN6-adenine-specific methylase5e-1063.9
NC_017243:2955597:295847829584782959041564Brachyspira intermedia PWS/A chromosome, complete genomeN6-adenine-specific methylase5e-0960.8
NC_015682:205900:221373221373221930558Thermodesulfobacterium sp. OPB45 chromosome, complete genomemethyltransferase3e-0858.5
NC_014166:2055984:208078020807802081370591Arcobacter nitrofigilis DSM 7299 chromosome, complete genomemethyltransferase1e-0755.8
NC_011244:213853:219364219364219960597Borrelia recurrentis A1, complete genomeN6-adenine-specific methylase, putative2e-0755.5
NC_017051:674000:674470674470675180711Rickettsia prowazekii str. Dachau chromosome, complete genomehypothetical protein1e-0652.8
NC_017050:676000:676327676327677037711Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein1e-0652.8
NC_017048:1018000:101850010185001019210711Rickettsia prowazekii str. GvV257 chromosome, complete genomehypothetical protein1e-0652.8
NC_000963:676000:676331676331677041711Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein1e-0652.8
NC_010673:205500:207140207140207712573Borrelia hermsii DAH, complete genomemethyltransferase2e-0652.4