Pre_GI: BLASTN Hits

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Query: NC_008463:632869 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 632869, End: 655984, Length: 23116

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome01172BLASTN svgBLASTP svg
NC_009434:796878*79687882874331866Pseudomonas stutzeri A1501, complete genome01025BLASTN svgBLASTP svg
NC_015733:443122*44312246159918478Pseudomonas putida S16 chromosome, complete genome01013BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome0997BLASTN svgBLASTP svg
NC_015379:6226661*6226661626523538575Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,0961BLASTN svgBLASTP svg
NC_004578:568236*56823659272224487Pseudomonas syringae pv. tomato str. DC3000, complete genome0805BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome0797BLASTN svgBLASTP svg
NC_011071:4000620*4000620403191731298Stenotrophomonas maltophilia R551-3, complete genome0706BLASTN svgBLASTP svg
NC_015947:3991696*3991696401521623521Burkholderia sp. JV3 chromosome, complete genome0642BLASTN svgBLASTP svg
NC_007508:4476726*4476726449836521640Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-152547BLASTN svgBLASTP svg
NC_007086:4489153*4489153450718918037Xanthomonas campestris pv. campestris str. 8004, complete genome3e-148533BLASTN svgBLASTP svg
NC_003902:4430621*4430621444960618986Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-148533BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome8e-133482BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete7e-115422BLASTN svgBLASTP svg
NC_008260:2340824*2340824238894248119Alcanivorax borkumensis SK2, complete genome3e-111410BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-110406BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome2e-108400BLASTN svgBLASTP svg
NC_014837:3739408*3739408376471125304Pantoea sp. At-9b chromosome, complete genome4e-107396BLASTN svgBLASTP svg
NC_010552:752007*75200777809926093Burkholderia ambifaria MC40-6 chromosome 2, complete sequence4e-107396BLASTN svgBLASTP svg
NC_007650:722961*72296174620423244Burkholderia thailandensis E264 chromosome II, complete sequence9e-105389BLASTN svgBLASTP svg
NC_014323:961825*96182598122819404Herbaspirillum seropedicae SmR1 chromosome, complete genome9e-102379BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-97365BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-97365BLASTN svgBLASTP svg
NC_012721:1986436*1986436201260326168Burkholderia glumae BGR1 chromosome 2, complete genome5e-97363BLASTN svgBLASTP svg
NC_006351:2398403*2398403241919020788Burkholderia pseudomallei K96243 chromosome 2, complete sequence8e-93349BLASTN svgBLASTP svg
NC_009075:2428248*2428248244904320796Burkholderia pseudomallei 668 chromosome II, complete sequence8e-93349BLASTN svgBLASTP svg
NC_009078:2351046*2351046237054119496Burkholderia pseudomallei 1106a chromosome II, complete sequence5e-88333BLASTN svgBLASTP svg
NC_007435:1077792*1077792110044222651Burkholderia pseudomallei 1710b chromosome II, complete sequence1e-85325BLASTN svgBLASTP svg
NC_014623:7331860*7331860735320421345Stigmatella aurantiaca DW4/3-1 chromosome, complete genome1e-79305BLASTN svgBLASTP svg
NC_012969:2476318*2476318252045544138Methylovorus glucosetrophus SIP3-4 chromosome, complete genome6e-75289BLASTN svgBLASTP svg
NC_007912:909112*90911293451825407Saccharophagus degradans 2-40, complete genome6e-75289BLASTN svgBLASTP svg
NC_014733:2363838*2363838239108027243Methylovorus sp. MP688 chromosome, complete genome1e-73285BLASTN svgBLASTP svg
NC_015856:1182974*1182974120901726044Collimonas fungivorans Ter331 chromosome, complete genome2e-72281BLASTN svgBLASTP svg
NC_007947:2447635*2447635249025042616Methylobacillus flagellatus KT, complete genome2e-72281BLASTN svgBLASTP svg
NC_007645:6407370*6407370643016222793Hahella chejuensis KCTC 2396, complete genome1e-70276BLASTN svgBLASTP svg
NC_009831:1255995*1255995127895522961Shewanella sediminis HAW-EB3, complete genome4e-70274BLASTN svgBLASTP svg
NC_009952:2381601*2381601241824736647Dinoroseobacter shibae DFL 12, complete genome2e-68268BLASTN svgBLASTP svg
NC_008149:587689*58768961062122933Yersinia pestis Nepal516, complete genome2e-62248BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-62248BLASTN svgBLASTP svg
NC_015556:40255594025559404512519567Pseudomonas fulva 12-X chromosome, complete genome5e-60240BLASTN svgBLASTP svg
NC_010676:2869936*2869936289564625711Burkholderia phytofirmans PsJN chromosome 2, complete sequence2e-59238BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-53216BLASTN svgBLASTP svg
NC_014118:2316000*2316000234104325044Burkholderia sp. CCGE1002 chromosome chromosome 2, complete1e-51212BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome1e-51212BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete7e-47196BLASTN svgBLASTP svg
NC_007509:64400064400066633222333Burkholderia sp. 383 chromosome 3, complete sequence4e-45190BLASTN svgBLASTP svg
NC_014761:1321187*1321187134459923413Oceanithermus profundus DSM 14977 chromosome, complete genome2e-44188BLASTN svgBLASTP svg
NC_012968:2228943*2228943225222323281Methylotenera mobilis JLW8, complete genome1e-39172BLASTN svgBLASTP svg
NC_013510:1849751*1849751187248222732Thermomonospora curvata DSM 43183, complete genome4e-33151BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome2e-31145BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome6e-29137BLASTN svgBLASTP svg
NC_009727:357206*35720637934622141Coxiella burnetii Dugway 7E9-12, complete genome9e-28133BLASTN svgBLASTP svg
NC_002971:1523065*1523065154336920305Coxiella burnetii RSA 493, complete genome9e-28133BLASTN svgBLASTP svg
NC_009053:1668500*1668500169468326184Actinobacillus pleuropneumoniae L20, complete genome1e-23119BLASTN svgBLASTP svg
NC_010939:1633000*1633000166140328404Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete3e-21111BLASTN svgBLASTP svg
NC_002927:506183*50618356896162779Bordetella bronchiseptica RB50, complete genome8e-19103BLASTN svgBLASTP svg
NC_008529:1042220*1042220107983637617Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete8e-19103BLASTN svgBLASTP svg
NC_008752:4747376*4747376477161024235Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-19103BLASTN svgBLASTP svg
NC_010645:36940836940840678237375Bordetella avium 197N, complete genome8e-19103BLASTN svgBLASTP svg
NC_015713:2453409*2453409249799944591Simkania negevensis Z chromosome gsn.131, complete genome3e-18101BLASTN svgBLASTP svg
NC_014314:755166*75516678070725542Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete1e-1799.6BLASTN svgBLASTP svg
NC_013715:767722*76772279120723486Rothia mucilaginosa DY-18, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007644:626992*62699269973472743Moorella thermoacetica ATCC 39073, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008054:1030994*1030994106151930526Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete5e-1487.7BLASTN svgBLASTP svg
NC_002935:1378566*1378566145023271667Corynebacterium diphtheriae NCTC 13129, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014910:42072274207227422797420748Alicycliphilus denitrificans BC chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013722:31174423117442314053923098Xanthomonas albilineans, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014484:1163576*1163576120142437849Spirochaeta thermophila DSM 6192 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011992:86317486317488672923556Acidovorax ebreus TPSY, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007963:11908471190847124782656980Chromohalobacter salexigens DSM 3043, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007404:35976435976438550125738Thiobacillus denitrificans ATCC 25259, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009439:60850060850063027421775Pseudomonas mendocina ymp, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010571:1263309*1263309129229528987Opitutus terrae PB90-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013889:25613812561381258452423144Thioalkalivibrio sp. K90mix chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_000919:74687574687576682819954Treponema pallidum subsp. pallidum str. Nichols, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009943:305854*30585433902633173Candidatus Desulfococcus oleovorans Hxd3, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010741:74535774535776827622920Treponema pallidum subsp. pallidum SS14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011662:1160887*1160887119009929213Thauera sp. MZ1T, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014623:4535544*4535544458023544692Stigmatella aurantiaca DW4/3-1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015152:2528399*2528399254787419476Spirochaeta sp. Buddy chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015714:741044*74104476557024527Treponema paraluiscuniculi Cuniculi A chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006322:2592176*2592176261693124756Bacillus licheniformis ATCC 14580, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007880:50840750840753094422538Francisella tularensis subsp. holarctica, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008369:51499551499553466619672Francisella tularensis subsp. holarctica OSU18, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010170:11032241103224112440821185Bordetella petrii, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010170:4533416*4533416456674433329Bordetella petrii, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015733:3923800*3923800394679722998Pseudomonas putida S16 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006270:2591317*2591317261497023654Bacillus licheniformis ATCC 14580, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008027:29969472996947302312426178Pseudomonas entomophila L48, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008702:2942246*2942246296909926854Azoarcus sp. BH72, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010424:531727*53172755409922373Candidatus Desulforudis audaxviator MP104C, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012856:3000839*3000839302487724039Ralstonia pickettii 12D chromosome 1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013159:1422370*1422370144159919230Saccharomonospora viridis DSM 43017, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015458:2338437*2338437237239533959Pusillimonas sp. T7-7 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015376:33208183320818335828337466Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-0661.9BLASTN svgBLASTP svg
NC_010002:1879220*1879220196064881429Delftia acidovorans SPH-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008782:14831551483155150744824294Acidovorax sp. JS42, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_002128:35000350006549030491Escherichia coli O157:H7 str. Sakai plasmid pO157, complete3e-0661.9BLASTN svgBLASTP svg