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Query: NC_008463:4867504 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 4867504, End: 4891011, Length: 23508

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008786:27296352729635277134341709Verminephrobacter eiseniae EF01-2, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_011750:1134721*1134721116006625346Escherichia coli IAI39 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014210:25970002597000263744640447Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_013508:2130681*2130681216209931419Edwardsiella tarda EIB202, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005810:1794490*1794490183441839929Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:2640440*2640440268328342844Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003143:2137945*2137945217709939155Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928145:2237099*2237099226332326225Escherichia coli 55989 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002797:20253302025330205156426235Escherichia coli NA114, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006155:1916426*1916426195791941494Yersinia pseudotuberculosis IP 32953, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007946:2074098*2074098210032326226Escherichia coli UTI89, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008150:1420825*1420825146012739303Yersinia pestis Antiqua, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011751:2281653*2281653230787726225Escherichia coli UMN026 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011748:2237099*2237099226332326225Escherichia coli 55989, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010634:1916000*1916000195790341904Yersinia pseudotuberculosis PB1/+, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:21645002164500220861544116Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008563:20948552094855212109926245Escherichia coli APEC O1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008253:1938975*1938975200160362629Escherichia coli 536, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019673:6298342*6298342632793229591Saccharothrix espanaensis DSM 44229 complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014550:30189430189431961117718Arthrobacter arilaitensis Re117, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012721:16359991635999166922033222Burkholderia glumae BGR1 chromosome 2, complete genome3e-0661.9BLASTN svgBLASTP svg