Pre_GI: BLASTN Hits

Some Help

Query: NC_008463:4389721 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 4389721, End: 4416635, Length: 26915

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002516:1236644*1236644126316626523Pseudomonas aeruginosa PAO1, complete genome018070BLASTN svgBLASTP svg
NC_011770:45915004591500460979518296Pseudomonas aeruginosa LESB58, complete genome014530BLASTN svgBLASTP svg
NC_009439:34850003485000350721722218Pseudomonas mendocina ymp, complete genome03527BLASTN svgBLASTP svg
NC_015410:3791500*3791500381292521426Pseudomonas mendocina NK-01 chromosome, complete genome03293BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome03192BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete03174BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome03067BLASTN svgBLASTP svg
NC_008463:1188951*1188951120759918649Pseudomonas aeruginosa UCBPP-PA14, complete genome02476BLASTN svgBLASTP svg
NC_002516:4321000*4321000434209921100Pseudomonas aeruginosa PAO1, complete genome02460BLASTN svgBLASTP svg
NC_005773:4282840*4282840431412131282Pseudomonas syringae pv. phaseolicola 1448A, complete genome02349BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome01065BLASTN svgBLASTP svg
NC_011901:27399842739984276222422241Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete0785BLASTN svgBLASTP svg
NC_013889:1514799*1514799153542720629Thioalkalivibrio sp. K90mix chromosome, complete genome0747BLASTN svgBLASTP svg
NC_016002:1975000*1975000202494749948Pseudogulbenkiania sp. NH8B, complete genome0658BLASTN svgBLASTP svg
NC_005085:24572952457295248428326989Chromobacterium violaceum ATCC 12472, complete genome0652BLASTN svgBLASTP svg
NC_007347:32046373204637323548530849Ralstonia eutropha JMP134 chromosome 1, complete sequence5e-159569BLASTN svgBLASTP svg
NC_019902:23720972372097239285820762Thioalkalivibrio nitratireducens DSM 14787, complete genome7e-146525BLASTN svgBLASTP svg
NC_007404:20480002048000206896120962Thiobacillus denitrificans ATCC 25259, complete genome2e-127464BLASTN svgBLASTP svg
NC_019940:13093591309359133197622618Thioflavicoccus mobilis 8321 chromosome, complete genome1e-113418BLASTN svgBLASTP svg
NC_011206:22391092239109225942920321Acidithiobacillus ferrooxidans ATCC 53993, complete genome4e-107396BLASTN svgBLASTP svg
NC_010645:3239420*3239420326166922250Bordetella avium 197N, complete genome3e-102381BLASTN svgBLASTP svg
NC_009439:3394174*3394174341925525082Pseudomonas mendocina ymp, complete genome6e-100373BLASTN svgBLASTP svg
NC_015942:25444072544407256835223946Acidithiobacillus ferrivorans SS3 chromosome, complete genome2e-84321BLASTN svgBLASTP svg
NC_013959:26663212666321269260826288Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-71278BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome3e-49204BLASTN svgBLASTP svg
NC_015410:37010003701000372390022901Pseudomonas mendocina NK-01 chromosome, complete genome3e-46194BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome2e-41178BLASTN svgBLASTP svg
NC_015947:22318422318424748524302Burkholderia sp. JV3 chromosome, complete genome6e-26127BLASTN svgBLASTP svg
NC_008095:63234566323456634843724982Myxococcus xanthus DK 1622, complete genome1e-24123BLASTN svgBLASTP svg
NC_015850:21476822147682217960631925Acidithiobacillus caldus SM-1 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_015711:81697528169752821033740586Myxococcus fulvus HW-1 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_014972:23716472371647239964127995Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007510:22840002284000230620022201Burkholderia sp. 383 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_015556:819503*81950384290123399Pseudomonas fulva 12-X chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011662:535613*53561355787622264Thauera sp. MZ1T, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015953:4908069*4908069493639628328Streptomyces sp. SirexAA-E chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg