Pre_GI: BLASTN Hits

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Query: NC_008463:4133700 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 4133700, End: 4158230, Length: 24531

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002516:14740001474000150946535466Pseudomonas aeruginosa PAO1, complete genome06379BLASTN svgBLASTP svg
NC_010512:110932*11093213790426973Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence01534BLASTN svgBLASTP svg
NC_003295:34215203421520348536463845Ralstonia solanacearum GMI1000, complete genome01176BLASTN svgBLASTP svg
NC_014117:2608000*2608000263073122732Burkholderia sp. CCGE1002 chromosome chromosome 1, complete01001BLASTN svgBLASTP svg
NC_010508:1206498*1206498122498518488Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence0886BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome4e-144519BLASTN svgBLASTP svg
NC_014500:84249384249388059638104Dickeya dadantii 3937 chromosome, complete genome5e-125456BLASTN svgBLASTP svg
NC_013592:16022421602242162704324802Dickeya dadantii Ech586, complete genome4e-107396BLASTN svgBLASTP svg
NC_014306:24424712442471247223629766Erwinia billingiae Eb661, complete genome1e-82315BLASTN svgBLASTP svg
NC_014500:35197223519722353859918878Dickeya dadantii 3937 chromosome, complete genome3e-80307BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome6e-63250BLASTN svgBLASTP svg
NC_014258:12750012750014912621627Pantoea vagans C9-1 plasmid pPag3, complete sequence3e-49204BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome2e-35159BLASTN svgBLASTP svg
NC_013850:26248992624899265699232094Klebsiella variicola At-22 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_009648:19560701956070197748821419Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-23119BLASTN svgBLASTP svg
NC_010172:4185904*4185904422075034847Methylobacterium extorquens PA1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_021066:1712905*1712905175859645692Raoultella ornithinolytica B6, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012791:26229232622923264743824516Variovorax paradoxus S110 chromosome 1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004578:21859072185907220851022604Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010524:2761394*2761394278436822975Leptothrix cholodnii SP-6, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015410:30934653093465315702663562Pseudomonas mendocina NK-01 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008782:1277117*1277117129923122115Acidovorax sp. JS42, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007963:32253063225306325338328078Chromohalobacter salexigens DSM 3043, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015563:4583906*4583906460773623831Delftia sp. Cs1-4 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg