Query: NC_008463:4133700 Pseudomonas aeruginosa UCBPP-PA14, complete genome
Start: 4133700, End: 4158230, Length: 24531
Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_002516:1474000 | 1474000 | 1509465 | 35466 | Pseudomonas aeruginosa PAO1, complete genome | 0 | 6379 | BLASTN svg | BLASTP svg |
NC_010512:110932* | 110932 | 137904 | 26973 | Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence | 0 | 1534 | BLASTN svg | BLASTP svg |
NC_003295:3421520 | 3421520 | 3485364 | 63845 | Ralstonia solanacearum GMI1000, complete genome | 0 | 1176 | BLASTN svg | BLASTP svg |
NC_014117:2608000* | 2608000 | 2630731 | 22732 | Burkholderia sp. CCGE1002 chromosome chromosome 1, complete | 0 | 1001 | BLASTN svg | BLASTP svg |
NC_010508:1206498* | 1206498 | 1224985 | 18488 | Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence | 0 | 886 | BLASTN svg | BLASTP svg |
NC_007492:3462929* | 3462929 | 3509406 | 46478 | Pseudomonas fluorescens PfO-1, complete genome | 4e-144 | 519 | BLASTN svg | BLASTP svg |
NC_014500:842493 | 842493 | 880596 | 38104 | Dickeya dadantii 3937 chromosome, complete genome | 5e-125 | 456 | BLASTN svg | BLASTP svg |
NC_013592:1602242 | 1602242 | 1627043 | 24802 | Dickeya dadantii Ech586, complete genome | 4e-107 | 396 | BLASTN svg | BLASTP svg |
NC_014306:2442471 | 2442471 | 2472236 | 29766 | Erwinia billingiae Eb661, complete genome | 1e-82 | 315 | BLASTN svg | BLASTP svg |
NC_014500:3519722 | 3519722 | 3538599 | 18878 | Dickeya dadantii 3937 chromosome, complete genome | 3e-80 | 307 | BLASTN svg | BLASTP svg |
NC_013421:1696746* | 1696746 | 1723099 | 26354 | Pectobacterium wasabiae WPP163, complete genome | 6e-63 | 250 | BLASTN svg | BLASTP svg |
NC_014258:127500 | 127500 | 149126 | 21627 | Pantoea vagans C9-1 plasmid pPag3, complete sequence | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_007492:4563981 | 4563981 | 4589496 | 25516 | Pseudomonas fluorescens PfO-1, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
NC_013850:2624899 | 2624899 | 2656992 | 32094 | Klebsiella variicola At-22 chromosome, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_009648:1956070 | 1956070 | 1977488 | 21419 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_010172:4185904* | 4185904 | 4220750 | 34847 | Methylobacterium extorquens PA1, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_021066:1712905* | 1712905 | 1758596 | 45692 | Raoultella ornithinolytica B6, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_012791:2622923 | 2622923 | 2647438 | 24516 | Variovorax paradoxus S110 chromosome 1, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_004578:2185907 | 2185907 | 2208510 | 22604 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010524:2761394* | 2761394 | 2784368 | 22975 | Leptothrix cholodnii SP-6, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015410:3093465 | 3093465 | 3157026 | 63562 | Pseudomonas mendocina NK-01 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_011992:1179084* | 1179084 | 1203830 | 24747 | Acidovorax ebreus TPSY, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008782:1277117* | 1277117 | 1299231 | 22115 | Acidovorax sp. JS42, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007963:3225306 | 3225306 | 3253383 | 28078 | Chromohalobacter salexigens DSM 3043, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015563:4583906* | 4583906 | 4607736 | 23831 | Delftia sp. Cs1-4 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |